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Ppcs Gene Detail
Summary
  • Symbol
    Ppcs
  • Name
    phosphopantothenoylcysteine synthetase
  • Synonyms
    6330579B17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915237
    NCBI Gene: 106564
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:119275727-119279617 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 55.38 cM, cytoband D1
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    132 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915237
 protein coding gene Chr4:119275724-119279673 (-)
129S1/SvImJ ENSMUSG00200011804
 protein coding gene Chr4:113180559-113184450 (-)
A/J ENSMUSG00195030507
 protein coding gene Chr4:114426527-114430424 (-)
AKR/J ENSMUSG00220020807
 protein coding gene Chr4:113787361-113791251 (-)
BALB/cJ ENSMUSG00180041960
 protein coding gene Chr4:112488288-112492185 (-)
C3H/HeJ ENSMUSG00175022311
 protein coding gene Chr4:113501463-113505360 (-)
C57BL/6NJ ENSMUSG00215015277
 protein coding gene Chr4:114613718-114617608 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026399
 protein coding gene Chr4:109971212-109975086 (-)
CAST/EiJ ENSTCUG00005042337
 protein coding gene Chr4:113307343-113311235 (-)
CBA/J ENSMUSG00210051626
 protein coding gene Chr4:113107951-113111848 (-)
DBA/2J ENSMUSG00185045127
 protein coding gene Chr4:114661511-114665409 (-)
FVB/NJ ENSMUSG00205017752
 protein coding gene Chr4:112584041-112587931 (-)
JF1/MsJ ENSUMUG00000014055
 protein coding gene Chr4:114566169-114570059 (-)
LP/J ENSMUSG00230042995
 protein coding gene Chr4:117998315-118002206 (-)
NOD/ShiLtJ ENSMUSG00190038756
 protein coding gene Chr4:112491729-112495619 (-)
NZO/HlLtJ ENSMUSG00225015132
 protein coding gene Chr4:123544798-123548688 (-)
PWK/PhJ ENSLUMG00010039035
 protein coding gene Chr4:111983444-111987336 (-)
SPRET/EiJ ENSMSPG00010035960
 protein coding gene Chr4:114072272-114076148 (-)
WSB/EiJ ENSIUOG00005037274
 protein coding gene Chr4:112801466-112805364 (-)



Homology
more
  • Human Ortholog
    PPCS, phosphopantothenoylcysteine synthetase
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PPCS, phosphopantothenoylcysteine synthetase
  • Synonyms
    CMD2C
  • Links
    NCBI Gene ID: 79717
    UniProt: Q9HAB8

  • Chr Location
    1p34.2; chr1:42456117-42473417 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human PPCS associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    23
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    691
  • Tissues
    94
  • cDNA Data
    61
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000028636 Ensembl Gene Model | MGI Sequence Detail 3891 C57BL/6J ±  kb
transcript ENSMUST00000030385 Ensembl | MGI Sequence Detail 1443 Not Applicable  
polypeptide ENSMUSP00000030385 Ensembl | MGI Sequence Detail 311 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 61
    cDNA 61

    Microarray probesets 4
Other
Accession IDs
less
MGI:2146837, MGI:2146923
References
more
  • Summaries
    All 45
    Developmental Gene Expression 1
    Gene Ontology 9
    Phenotypes 13
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:336439 Mostert KJ, et al., The Coenzyme A Level Modulator Hopantenate (HoPan) Inhibits Phosphopantotenoylcysteine Synthetase Activity. ACS Chem Biol. 2021 Nov 19;16(11):2401-2414
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory