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Coq9 Gene Detail
Summary
  • Symbol
    Coq9
  • Name
    coenzyme Q9
  • Synonyms
    2310005O14Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915164
    NCBI Gene: 67914
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:95565041-95581523 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 46.89 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    253 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915164
 protein coding gene Chr8:95564949-95581523 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033971
 protein coding gene Chr8:96278130-96295707 (+)
A/J MGP_AJ_G0033954
 protein coding gene Chr8:92526762-92543108 (+)
AKR/J MGP_AKRJ_G0033880
 protein coding gene Chr8:95046103-95062186 (+)
BALB/cJ MGP_BALBcJ_G0033946
 protein coding gene Chr8:92608285-92624613 (+)
C3H/HeJ MGP_C3HHeJ_G0033656
 protein coding gene Chr8:95761855-95778715 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034467
 protein coding gene Chr8:99782948-99805846 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031408
 protein coding gene Chr8:86329137-86345944 (+)
CAST/EiJ MGP_CASTEiJ_G0032988
 protein coding gene Chr8:95366465-95382820 (+)
CBA/J MGP_CBAJ_G0033632
 protein coding gene Chr8:103077091-103093411 (+)
DBA/2J MGP_DBA2J_G0033786
 protein coding gene Chr8:91985147-92002014 (+)
FVB/NJ MGP_FVBNJ_G0033733
 protein coding gene Chr8:90955752-90971988 (+)
LP/J MGP_LPJ_G0033878
 protein coding gene Chr8:96424887-96441545 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033775
 protein coding gene Chr8:105370445-105387969 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034485
 protein coding gene Chr8:95213058-95229374 (+)
PWK/PhJ MGP_PWKPhJ_G0032690
 protein coding gene Chr8:91372887-91389746 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032527
 protein coding gene Chr8:94058402-94074810 (+)
WSB/EiJ MGP_WSBEiJ_G0033100
 protein coding gene Chr8:95746152-95762462 (+)



Homology
more
  • Human Ortholog
    COQ9, coenzyme Q9
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    COQ9, coenzyme Q9
  • Synonyms
    C16orf49, COQ10D5
  • Links
    NCBI Gene ID: 57017
    neXtProt AC: NX_O75208
    UniProt: O75208

  • Chr Location
    16q21; chr16:57447425-57461270 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with Coq9 mouse models; 1 with human COQ9 associations

Human Disease Mouse Models
      
IDs
 View 1 model
      
IDs
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    22 phenotypes from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-in allele exhibit premature death, encephalomyopathy, hair loss, weight loss, demyelination, cardiac fibrosis and abnromal mitochondrial function.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    17
  • GO References
    11
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    712
  • Tissues
    3
  • cDNA Data
    160
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 67914 NCBI Gene Model | MGI Sequence Detail 16483 C57BL/6J ±  kb
    transcript NM_026452 RefSeq | MGI Sequence Detail 1697 C57BL/6  
    polypeptide Q8K1Z0 UniProt | EBI | MGI Sequence Detail 313 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 161
      cDNA 160
      Primer pair 1

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:2142852
    References
    more
    • Summaries
      All 44
      Developmental Gene Expression 1
      Diseases 1
      Gene Ontology 11
      Phenotypes 13
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:305946 Xu M, et al., The SRCAP chromatin remodeling complex promotes oxidative metabolism during prenatal heart development. Development. 2021 Apr 15;148(8):dev199026
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/09/2024
    MGI 6.23     		The Jackson Laboratory