4930527F14Rik Gene Detail

Summary

• Symbol
  4930527F14Rik
• Name
  RIKEN cDNA 4930527F14 gene

• Feature Type
  lncRNA gene
• IDs
  MGI:1914901
  NCBI Gene: 67651
• Alliance
  genome feature page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr14:45781167-45800334 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  613 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914901	lncRNA gene	Chr14:45767778-45835969 (+)
129S1/SvImJ	ENSMUSG00200016593	lncRNA gene	Chr14:34557627-34590209 (+)
A/J	ENSMUSG00195024763	lncRNA gene	Chr14:34786255-34818838 (+)
AKR/J	ENSMUSG00220038982	lncRNA gene	Chr14:34145842-34178427 (+)
BALB/cJ	ENSMUSG00180046928	lncRNA gene	Chr14:34389939-34422524 (+)
C3H/HeJ	ENSMUSG00175028154	lncRNA gene	Chr14:36075743-36108337 (+)
C57BL/6NJ	ENSMUSG00215040194	lncRNA gene	Chr14:34786902-34819483 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005010415	lncRNA gene	Chr14:36591055-36623709 (+)
CBA/J	ENSMUSG00210046350	lncRNA gene	Chr14:34721073-34753655 (+)
DBA/2J	ENSMUSG00185016142	lncRNA gene	Chr14:39508979-39541658 (+)
FVB/NJ	ENSMUSG00205049325	lncRNA gene	Chr14:33940975-33973566 (+)
JF1/MsJ	ENSUMUG00000055950	lncRNA gene	Chr14:51550978-51583690 (+)
LP/J	ENSMUSG00230021546	lncRNA gene	Chr14:51778786-51811516 (+)
NOD/ShiLtJ	ENSMUSG00190039427	lncRNA gene	Chr14:34413118-34445700 (+)
NZO/HlLtJ	ENSMUSG00225050823	lncRNA gene	Chr14:42016309-42048988 (+)
PWK/PhJ	ENSLUMG00010040160	lncRNA gene	Chr14:34019953-34052751 (+)
SPRET/EiJ	ENSMSPG00010003596	lncRNA gene	Chr14:37344801-37377441 (+)
WSB/EiJ	ENSIUOG00005039604	lncRNA gene	Chr14:34261896-34294555 (+)

Homology

• Gene Tree
  4930527F14Rik
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  9 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Transgenic
  1
• Genomic Mutations
  2 involving 4930527F14Rik
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  597
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  58
• RefSeq
  1

• Ensembl
  ENSMUSG00000115324 (Evidence)
• NCBI Gene
  67651

Representative Sequences			Length	Strain/Species
genomic	67651	NCBI Gene Model | MGI Sequence Detail	19168	C57BL/6J
transcript	NR_045809	RefSeq | MGI Sequence Detail	735	ZRU/MplStud

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 16

  Diseases 1

  Phenotypes 9
• Earliest
  J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
• Latest
  J:358278 Yang Y, et al., Erythrocytic alpha-Synuclein and the Gut Microbiome: Kindling of the Gut-Brain Axis in Parkinson's Disease. Mov Disord. 2024 Jan;39(1):40-52

TSS for 4930527F14Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr125222	Chr14:45781132-45781149 (+)	-26 bp