1700039M10Rik MGI Mouse Gene Detail - MGI:1914768

Sequence Map

Chr14:57809071-57809825 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914768	lncRNA gene	Chr14:57805255-57809929 (+)
129S1/SvImJ	ENSMUSG00200043981	lncRNA gene	Chr14:46394331-46395085 (+)
A/J	ENSMUSG00195038133	lncRNA gene	Chr14:46609591-46610345 (+)
AKR/J	ENSMUSG00220034327	lncRNA gene	Chr14:45936549-45937303 (+)
BALB/cJ	ENSMUSG00180052456	lncRNA gene	Chr14:46231614-46232368 (+)
C3H/HeJ	ENSMUSG00175051086	lncRNA gene	Chr14:47938144-47938898 (+)
C57BL/6NJ	ENSMUSG00215049660	lncRNA gene	Chr14:46132285-46133039 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0005044	lincRNA gene	Chr14:48818029-48818834 (+)
CAST/EiJ	ENSTCUG00005050370	lncRNA gene	Chr14:47910124-47911077 (+)
CBA/J	ENSMUSG00210048366	lncRNA gene	Chr14:46599962-46600716 (+)
DBA/2J	ENSMUSG00185034435	lncRNA gene	Chr14:51732116-51732871 (+)
FVB/NJ	ENSMUSG00205047496	lncRNA gene	Chr14:46001978-46002732 (+)
JF1/MsJ	ENSUMUG00000049085	lncRNA gene	Chr14:62903233-62904186 (+)
LP/J	ENSMUSG00230037086	lncRNA gene	Chr14:63763322-63764076 (+)
NOD/ShiLtJ	ENSMUSG00190050257	lncRNA gene	Chr14:46366286-46367040 (+)
NZO/HlLtJ	ENSMUSG00225047254	lncRNA gene	Chr14:54056632-54057386 (+)
PWK/PhJ	ENSLUMG00010050050	lncRNA gene	Chr14:45825917-45826671 (+)
SPRET/EiJ	ENSMSPG00010047582	lncRNA gene	Chr14:49345641-49346397 (+)
WSB/EiJ	ENSIUOG00005047217	lncRNA gene	Chr14:45793067-45793822 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	67518	NCBI Gene Model \| MGI Sequence Detail	755	C57BL/6J	± kb
	transcript	NR_152103	RefSeq \| MGI Sequence Detail	532	C57BL/6

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Summaries

All 14

Phenotypes 6
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for 1700039M10Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr125873	Chr14:57809051-57809082 (+)	-4 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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