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Saysd1 Gene Detail
Summary
  • Symbol
    Saysd1
  • Name
    SAYSVFN motif domain containing 1
  • Synonyms
    1810063B07Rik, 4930488P03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914759
    NCBI Gene: 67509
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr14:20125704-20133240 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 14, 11.40 cM, cytoband A3
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    38 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914759
 protein coding gene Chr14:20125704-20188602 (-)
129S1/SvImJ MGP_129S1SvImJ_G0021027
 protein coding gene Chr14:12814626-12822152 (-)
A/J MGP_AJ_G0020976
 protein coding gene Chr14:12524922-12532569 (-)
AKR/J MGP_AKRJ_G0020953
 protein coding gene Chr14:13035489-13043016 (-)
BALB/cJ MGP_BALBcJ_G0020979
 protein coding gene Chr14:12639976-12647502 (-)
C3H/HeJ MGP_C3HHeJ_G0020763
 protein coding gene Chr14:12975407-12983678 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021412
 protein coding gene Chr14:13318711-13326237 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018980
 protein coding gene Chr14:12840162-12847510 (-)
CAST/EiJ MGP_CASTEiJ_G0020287
 protein coding gene Chr14:12729395-12737129 (-)
CBA/J MGP_CBAJ_G0020729
 protein coding gene Chr14:13979631-13987349 (-)
DBA/2J MGP_DBA2J_G0020852
 protein coding gene Chr14:12355711-12363429 (-)
FVB/NJ MGP_FVBNJ_G0020835
 protein coding gene Chr14:12255646-12263172 (-)
LP/J MGP_LPJ_G0020928
 protein coding gene Chr14:13028319-13035845 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020861
 protein coding gene Chr14:13778810-13786336 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021445
 protein coding gene Chr14:12831572-12839100 (-)
PWK/PhJ MGP_PWKPhJ_G0020036
 protein coding gene Chr14:11899592-11907135 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019858
 protein coding gene Chr14:12601367-12608877 (-)
WSB/EiJ MGP_WSBEiJ_G0020343
 protein coding gene Chr14:12817530-12825058 (-)



Homology
more
  • Human Ortholog
    SAYSD1, SAYSVFN motif domain containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SAYSD1, SAYSVFN motif domain containing 1
  • Synonyms
    C6orf64
  • Links
    NCBI Gene ID: 55776
    neXtProt AC: NX_Q9NPB0
    UniProt: Q9NPB0

  • Chr Location
    6p21.2; chr6:39104063-39115193 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 2 alleles in 2 genetic backgrounds
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    54
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 67509 NCBI Gene Model | MGI Sequence Detail 7537 C57BL/6J ±  kb
transcript NM_026209 RefSeq | MGI Sequence Detail 2314 C57BL/6  
polypeptide Q8K190 UniProt | EBI | MGI Sequence Detail 188 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 54
    cDNA 54

    Microarray probesets 3
Other
Accession IDs
less
MGI:1922229
References
more
  • Summaries
    All 29
    Gene Ontology 2
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:340694 Chang L, et al., The UFMylated ribosome-recognition protein SAYSD1 is predominantly expressed in spermatids but is dispensable for fertility in mice. Biochem Biophys Res Commun. 2023 Jun 28;674:102-108
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory