Ubald2 MGI Mouse Gene Detail - MGI:1914635 - UBA-like domain containing 2

Symbol

Ubald2
Name

UBA-like domain containing 2
Synonyms

1110014K08Rik, D030012E24Rik, Fam100b

Feature Type

protein coding gene
IDs

MGI:1914635
NCBI Gene: 319370
Alliance

genome feature page
Transcription Start Sites

5 TSS

Sequence Map

Chr11:116324920-116329903 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 11, 81.29 cM
Mapping Data

2 experiments

SNPs within 2kb

169 from dbSNP Build 142
Strain Annotations

22

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914635	protein coding gene	Chr11:116324920-116329903 (+)
129S1/SvImJ	ENSMUSG00200048917	protein coding gene	Chr11:113686492-113691485 (+)
129S1/SvImJ	ENSMUSG00200008413	protein coding gene	Chr7:46718651-46719923 (+)
A/J	ENSMUSG00195024538	protein coding gene	Chr11:113390878-113395885 (+)
AKR/J	ENSMUSG00220023676	protein coding gene	Chr11:113495471-113500455 (+)
BALB/cJ	ENSMUSG00180050905	protein coding gene	Chr11:113687496-113692496 (+)
C3H/HeJ	ENSMUSG00175003187	protein coding gene	Chr7:48492896-48493557 (+)
C3H/HeJ	ENSMUSG00175037779	protein coding gene	Chr11:113642659-113647666 (+)
C57BL/6NJ	ENSMUSG00215044411	protein coding gene	Chr11:113185102-113190089 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0017442	protein coding gene	Chr11:112282234-112286840 (+)
CAST/EiJ	ENSTCUG00005027227	protein coding gene	Chr11:113045485-113050520 (+)
CBA/J	ENSMUSG00210017437	protein coding gene	Chr7:48595220-48596492 (+)
CBA/J	ENSMUSG00210050498	protein coding gene	Chr11:113362638-113367643 (+)
DBA/2J	ENSMUSG00185025673	protein coding gene	Chr11:113678971-113683967 (+)
FVB/NJ	ENSMUSG00205021955	protein coding gene	Chr11:113486691-113491680 (+)
JF1/MsJ	no annotation
LP/J	ENSMUSG00230050775	protein coding gene	Chr11:114735948-114740953 (+)
LP/J	ENSMUSG00230005857	protein coding gene	Chr7:58766204-58766865 (+)
NOD/ShiLtJ	ENSMUSG00190003519	protein coding gene	Chr7:48632177-48632838 (+)
NOD/ShiLtJ	ENSMUSG00190035465	protein coding gene	Chr11:113710083-113715075 (+)
NZO/HlLtJ	ENSMUSG00225052642	protein coding gene	Chr11:116788445-116793437 (+)
PWK/PhJ	ENSLUMG00010019971	protein coding gene	Chr11:113463211-113468271 (+)
SPRET/EiJ	no annotation
WSB/EiJ	ENSIUOG00005038705	protein coding gene	Chr11:113451221-113456232 (+)

Human Ortholog

UBALD2, UBA like domain containing 2

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

UBALD2, UBA like domain containing 2
Synonyms

FAM100B
Links

HGNC:28438

NCBI Gene ID: 283991

UniProt: Q8IYN6
Chr Location

17q25.1; chr17:76265348-76271298 (+) GRCh38

MGI Vertebrate Homology

Ubald2 stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: UBALD2
Gene Tree

Ubald2

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Phenotype Summary

6 phenotype references

All Mutations and Alleles

35
Endonuclease-mediated

1
Gene trapped

33
Targeted

1
Incidental Mutations

APF
Find Mice (IMSR)

22 strains or lines available

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

597
cDNA Data

10

Tissue x Stage Matrix

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase ubald2

ZFIN ubald2

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All Sequences

47
RefSeq

2
UniProt

2
CCDS

CCDS25666.1

Ensembl

ENSMUSG00000050628 (Evidence)
NCBI Gene

319370

			Length	Strain/Species	Flank
genomic	319370	NCBI Gene Model \| MGI Sequence Detail	4984	C57BL/6J	± kb
transcript	NM_176902	RefSeq \| MGI Sequence Detail	1498	C57BL/6
polypeptide	Q8BQH4	UniProt \| EBI \| MGI Sequence Detail	164	Not Applicable

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UniProt

2 Sequences
Protein Ontology

PR:000030661 UBA-like domain-containing protein 2

(term hierarchy)
InterPro Domains

IPR054109 UBA-like domain

IPR039310 UBA-like domain-containing protein 1/2

IPR009060 UBA-like superfamily
GlyGen

Q8BQH4 1 site

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All nucleic 10

cDNA 10

Microarray probesets 8

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MGI:2441930

Summaries

All 26

Phenotypes 6
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Ubald2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr105955	Chr11:116324893-116324904 (+)	-21 bp
Tssr105956	Chr11:116324913-116324932 (+)	3 bp
Tssr105957	Chr11:116325020-116325053 (+)	117 bp
Tssr105958	Chr11:116325058-116325080 (+)	149 bp
Tssr105959	Chr11:116327798-116327846 (+)	2,902 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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