Kcnmb4os1 MGI Mouse Gene Detail - MGI:1914592 - potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1

Symbol

Kcnmb4os1
Name

potassium large conductance calcium-activated channel, subfamily M, beta member 4, opposite strand 1
Synonyms

1700058G18Rik

Feature Type

antisense lncRNA gene

BioType Conflict
IDs

MGI:1914592
NCBI Gene: 67342
Alliance

genome feature page
Transcription Start Sites

3 TSS

Sequence Map

Chr10:116254026-116257140 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 10, 64.73 cM
Mapping Data

1 experiment

SNPs within 2kb

174 from dbSNP Build 142
Strain Annotations

31

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1914592	antisense lncRNA gene	Chr10:116253442-116257152 (+)
129S1/SvImJ	ENSMUSG00200024753	protein coding gene	Chr10:112662520-112666593 (+)
129S1/SvImJ	ENSMUSG00200027291	lncRNA gene	Chr10:112663136-112666321 (+)
A/J	ENSMUSG00195023482	lncRNA gene	Chr10:113097840-113101025 (+)
A/J	ENSMUSG00195020407	protein coding gene	Chr10:113097224-113101297 (+)
AKR/J	ENSMUSG00220014750	protein coding gene	Chr10:112670916-112674989 (+)
AKR/J	ENSMUSG00220015235	lncRNA gene	Chr10:112671532-112674717 (+)
BALB/cJ	ENSMUSG00180015292	protein coding gene	Chr10:113114185-113118258 (+)
BALB/cJ	ENSMUSG00180017700	lncRNA gene	Chr10:113114801-113117986 (+)
C3H/HeJ	ENSMUSG00175023354	protein coding gene	Chr10:113059131-113063204 (+)
C3H/HeJ	ENSMUSG00175026048	lncRNA gene	Chr10:113059747-113062932 (+)
C57BL/6NJ	ENSMUSG00215022459	lncRNA gene	Chr10:112756106-112759291 (+)
C57BL/6NJ	ENSMUSG00215011912	protein coding gene	Chr10:112755490-112759563 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0002549	antisense lncRNA gene	Chr10:109211257-109214491 (+)
CAST/EiJ	ENSTCUG00005032715	lncRNA gene	Chr10:112078077-112081297 (+)
CBA/J	ENSMUSG00210020961	protein coding gene	Chr10:112908692-112912765 (+)
CBA/J	ENSMUSG00210021702	lncRNA gene	Chr10:112909308-112912493 (+)
DBA/2J	ENSMUSG00185007983	protein coding gene	Chr10:113033615-113037688 (+)
DBA/2J	ENSMUSG00185009780	lncRNA gene	Chr10:113034231-113037416 (+)
FVB/NJ	ENSMUSG00205026442	lncRNA gene	Chr10:112358778-112361963 (+)
FVB/NJ	ENSMUSG00205016664	protein coding gene	Chr10:112358162-112362235 (+)
JF1/MsJ	ENSUMUG00000021211	lncRNA gene	Chr10:114354175-114357393 (+)
LP/J	ENSMUSG00230022696	protein coding gene	Chr10:114982585-114986656 (+)
LP/J	ENSMUSG00230026676	lncRNA gene	Chr10:114983201-114986386 (+)
NOD/ShiLtJ	ENSMUSG00190017723	protein coding gene	Chr10:113158768-113162841 (+)
NOD/ShiLtJ	ENSMUSG00190018821	lncRNA gene	Chr10:113159384-113162569 (+)
NZO/HlLtJ	ENSMUSG00225017236	protein coding gene	Chr10:119237461-119241534 (+)
NZO/HlLtJ	ENSMUSG00225018470	lncRNA gene	Chr10:119238077-119241262 (+)
PWK/PhJ	ENSLUMG00010013292	lncRNA gene	Chr10:112742507-112745701 (+)
SPRET/EiJ	ENSMSPG00010017642	lncRNA gene	Chr10:114676872-114680065 (+)
WSB/EiJ	ENSIUOG00005014291	lncRNA gene	Chr10:112742784-112745969 (+)

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Gene Tree

Kcnmb4os1

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Phenotype Summary

7 phenotype references

All Mutations and Alleles

2
Chemically induced (other)

1
Gene trapped

1
Genomic Mutations

1 involving Kcnmb4os1
Find Mice (IMSR)

0 strains or lines available

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

597
cDNA Data

4

Tissue x Stage Matrix

Other Mouse Links

GEO

Expression Atlas

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All Sequences

41
RefSeq

1
UniProt

1

Ensembl

ENSMUSG00000020164 (Evidence)
NCBI Gene

67342

			Length	Strain/Species	Flank
genomic	67342	NCBI Gene Model \| MGI Sequence Detail	3115	C57BL/6J	± kb
transcript	NR_028107	RefSeq \| MGI Sequence Detail	753	C57BL/6
polypeptide	Q9D9J6	UniProt \| EBI \| MGI Sequence Detail	111	Not Applicable

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UniProt

1 Sequence

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All nucleic 4

cDNA 4

Microarray probesets 2

Summaries

All 21

Phenotypes 7
Earliest

J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Latest

J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14

TSS for Kcnmb4os1:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr95869	Chr10:116253953-116254008 (+)	-45 bp
Tssr95870	Chr10:116254022-116254042 (+)	6 bp
Tssr95871	Chr10:116254044-116254053 (+)	23 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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