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Iqcf4 Gene Detail
Summary
  • Symbol
    Iqcf4
  • Name
    IQ motif containing F4
  • Synonyms
    1700042N06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914570
    NCBI Gene: 67320
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:106445518-106448166 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 57.80 cM, cytoband F1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914570
 protein coding gene Chr9:106445518-106448195 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035239
 protein coding gene Chr9:108386082-108388619 (-)
A/J MGP_AJ_G0035218
 protein coding gene Chr9:104458478-104461027 (-)
AKR/J MGP_AKRJ_G0035150
 protein coding gene Chr9:107064786-107067305 (-)
BALB/cJ MGP_BALBcJ_G0035212
 protein coding gene Chr9:104145971-104148610 (-)
C3H/HeJ MGP_C3HHeJ_G0034922
 protein coding gene Chr9:107476651-107480024 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035732
 protein coding gene Chr9:111370202-111372843 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032630
 protein coding gene Chr9:101945175-101947830 (-)
CAST/EiJ MGP_CASTEiJ_G0034233
 protein coding gene Chr9:107396455-107398965 (-)
CBA/J MGP_CBAJ_G0034890
 protein coding gene Chr9:115313650-115316301 (-)
DBA/2J MGP_DBA2J_G0035051
 protein coding gene Chr9:103922864-103925404 (-)
FVB/NJ MGP_FVBNJ_G0034999
 protein coding gene Chr9:102701754-102704832 (-)
LP/J MGP_LPJ_G0035127
 protein coding gene Chr9:108601650-108604199 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035038
 protein coding gene Chr9:116888225-116891723 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0035753
 protein coding gene Chr9:107327377-107330042 (-)
PWK/PhJ MGP_PWKPhJ_G0033940
 protein coding gene Chr9:104225007-104228233 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033775
 protein coding gene Chr9:107396309-107398762 (-)
WSB/EiJ MGP_WSBEiJ_G0034354
 protein coding gene Chr9:107217518-107222939 (-)



Homology
more
  • Human Ortholog
    IQCF4P, IQ motif containing F4, pseudogene
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IQCF4P, IQ motif containing F4, pseudogene
  • Synonyms
    IQCF4
  • Links
    NCBI Gene ID: 100506840

  • Chr Location
    chr3:51817603-51819635 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 67320 NCBI Gene Model | MGI Sequence Detail 2649 C57BL/6J ±  kb
transcript NM_026090 RefSeq | MGI Sequence Detail 863 Not Specified  
polypeptide NP_080366 RefSeq | MGI Sequence Detail 204 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR039887 IQ domain-containing protein F
    IPR000048 IQ motif, EF-hand binding site
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 5
References
more
  • Summaries
    All 21
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory