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2900089D17Rik Gene Detail
Summary
  • Symbol
    2900089D17Rik
  • Name
    RIKEN cDNA 2900089D17 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1914527
    NCBI Gene: 67277
  • Alliance
    genome feature page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:144178591-144193054 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 83.18 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    522 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914527
 lncRNA gene Chr5:144178500-144193054 (-)
129S1/SvImJ ENSMUSG00200042244
 lncRNA gene Chr5:138020557-138034845 (-)
A/J ENSMUSG00195046881
 lncRNA gene Chr5:137680285-137694669 (-)
AKR/J ENSMUSG00220023414
 lncRNA gene Chr5:136898085-136912376 (-)
BALB/cJ ENSMUSG00180035162
 lncRNA gene Chr5:137782309-137796697 (-)
C3H/HeJ ENSMUSG00175049858
 lncRNA gene Chr5:139707779-139722163 (-)
C57BL/6NJ ENSMUSG00215041888
 lncRNA gene Chr5:137627805-137642301 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005035449
 lncRNA gene Chr5:137053236-137067942 (-)
CBA/J ENSMUSG00210024358
 lncRNA gene Chr5:138524557-138538947 (-)
DBA/2J ENSMUSG00185041415
 lncRNA gene Chr5:141508951-141523448 (-)
FVB/NJ ENSMUSG00205041876
 lncRNA gene Chr5:137333500-137347997 (-)
JF1/MsJ ENSUMUG00000049816
 lncRNA gene Chr5:144378963-144393569 (-)
LP/J ENSMUSG00230030462
 lncRNA gene Chr5:145624259-145638547 (-)
NOD/ShiLtJ ENSMUSG00190046641
 lncRNA gene Chr5:137472192-137486688 (-)
NZO/HlLtJ ENSMUSG00225009732
 lncRNA gene Chr5:153106436-153120932 (-)
PWK/PhJ ENSLUMG00010020541
 lncRNA gene Chr5:136095429-136109788 (-)
SPRET/EiJ ENSMSPG00010041193
 lncRNA gene Chr5:139688958-139709700 (-)
WSB/EiJ ENSIUOG00005038537
 lncRNA gene Chr5:140008139-140022632 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    3
Sequences &
Gene Models
less
  • All Sequences
    34
  • RefSeq
    5
Representative SequencesLengthStrain/SpeciesFlank
genomic 67277 NCBI Gene Model | MGI Sequence Detail 14464 C57BL/6J ±  kb
transcript NR_190063 RefSeq | MGI Sequence Detail 690 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
References
more
  • Summaries
    All 8
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory