About   Help   FAQ
Nop56 Gene Detail
Summary
  • Symbol
    Nop56
  • Name
    NOP56 ribonucleoprotein
  • Synonyms
    2310044F10Rik, 56kDa with KKE/D repeat, Nol5a, NOP56
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914384
    NCBI Gene: 67134
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:130116350-130121233 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 63.20 cM, cytoband F3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    183 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914384
 protein coding gene Chr2:130112904-130121233 (+)
129S1/SvImJ ENSMUSG00200047653
 protein coding gene Chr2:127157733-127162616 (+)
A/J ENSMUSG00195027440
 protein coding gene Chr2:127192159-127197043 (+)
AKR/J ENSMUSG00220038222
 protein coding gene Chr2:126951203-126956086 (+)
BALB/cJ ENSMUSG00180045826
 protein coding gene Chr2:127005728-127010609 (+)
C3H/HeJ ENSMUSG00175041549
 protein coding gene Chr2:127539758-127544635 (+)
C57BL/6NJ ENSMUSG00215032681
 protein coding gene Chr2:127040277-127045160 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024295
 protein coding gene Chr2:123057507-123062407 (+)
CAST/EiJ ENSTCUG00005036807
 protein coding gene Chr2:126314650-126319525 (+)
CBA/J ENSMUSG00210033687
 protein coding gene Chr2:127396664-127401541 (+)
DBA/2J ENSMUSG00185033596
 protein coding gene Chr2:127045137-127050020 (+)
FVB/NJ ENSMUSG00205032836
 protein coding gene Chr2:126211779-126216656 (+)
JF1/MsJ ENSUMUG00000016053
 protein coding gene Chr2:126859375-126864250 (+)
LP/J ENSMUSG00230035742
 protein coding gene Chr2:128792929-128797812 (+)
NOD/ShiLtJ ENSMUSG00190013439
 protein coding gene Chr2:127150521-127155404 (+)
NZO/HlLtJ ENSMUSG00225027383
 protein coding gene Chr2:136701776-136706659 (+)
PWK/PhJ ENSLUMG00010034239
 protein coding gene Chr2:126821603-126826483 (+)
SPRET/EiJ ENSMSPG00010025994
 protein coding gene Chr2:129201845-129206713 (+)
WSB/EiJ ENSIUOG00005043427
 protein coding gene Chr2:126974309-126979188 (+)



Homology
more
  • Human Ortholog
    NOP56, NOP56 ribonucleoprotein
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NOP56, NOP56 ribonucleoprotein
  • Synonyms
    NOL5A, SCA36
  • Links
    NCBI Gene ID: 10528
    UniProt: O00567

  • Chr Location
    20p13; chr20:2652592-2658393 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with human NOP56 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    32
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    609
  • Tissues
    10
  • cDNA Data
    248
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000027405 Ensembl Gene Model | MGI Sequence Detail 4884 C57BL/6J ±  kb
transcript ENSMUST00000103198 Ensembl | MGI Sequence Detail 1877 Not Applicable  
polypeptide ENSMUSP00000099487 Ensembl | MGI Sequence Detail 580 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 252
    cDNA 252

    Microarray probesets 4
References
more
  • Summaries
    All 48
    Developmental Gene Expression 4
    Gene Ontology 8
    Phenotypes 11
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:314906 Khang R, et al., Loss of zinc-finger protein 212 leads to Purkinje cell death and locomotive abnormalities with phospholipase D3 downregulation. Sci Rep. 2021 Nov 23;11(1):22745
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory