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4933404O12Rik Gene Detail
Summary
  • Symbol
    4933404O12Rik
  • Name
    RIKEN cDNA 4933404O12 gene
  • Feature Type
    lncRNA gene
  • IDs
    MGI:1914002
    NCBI Gene: 66752
  • Alliance
    gene page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:136948000-136965963 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 76.03 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    191 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914002
 lncRNA gene Chr5:136947964-136965968 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006833
 lincRNA gene Chr5:141618053-141636286 (+)
A/J MGP_AJ_G0006827
 lincRNA gene Chr5:135489170-135507159 (+)
AKR/J MGP_AKRJ_G0006797
 lincRNA gene Chr5:139873281-139895905 (+)
BALB/cJ MGP_BALBcJ_G0006803
 lincRNA gene Chr5:136849500-136868500 (+)
C3H/HeJ MGP_C3HHeJ_G0006748
 lincRNA gene Chr5:140496947-140516474 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006967
 lincRNA gene Chr5:146890101-146908074 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0006221
 lincRNA gene Chr5:129763784-129783757 (+)
CAST/EiJ MGP_CASTEiJ_G0006670
 lincRNA gene Chr5:139912628-139934559 (+)
CBA/J MGP_CBAJ_G0006730
 lincRNA gene Chr5:152618477-152636494 (+)
DBA/2J MGP_DBA2J_G0006750
 lincRNA gene Chr5:135384810-135403068 (+)
FVB/NJ MGP_FVBNJ_G0006774
 lincRNA gene Chr5:134561738-134579971 (+)
LP/J MGP_LPJ_G0006834
 lincRNA gene Chr5:142055375-142074635 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006757
 lincRNA gene Chr5:155534150-155552779 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006970
 lincRNA gene Chr5:139705587-139725019 (+)
PWK/PhJ MGP_PWKPhJ_G0006610
 lincRNA gene Chr5:134471265-134489821 (+)
SPRET/EiJ MGP_SPRETEiJ_G0006516
 lincRNA gene Chr5:137295583-137312784 (+)
WSB/EiJ MGP_WSBEiJ_G0006721
 lincRNA gene Chr5:140442523-140462586 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    14
Sequences &
Gene Models
less
  • All Sequences
    40
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 66752 NCBI Gene Model | MGI Sequence Detail 17964 C57BL/6J ±  kb
transcript NR_015555 RefSeq | MGI Sequence Detail 3985 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 3
Other
Accession IDs
less
MGI:2141202
References
more
  • Summaries
    All 17
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory