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Trappc5 Gene Detail
Summary
  • Symbol
    Trappc5
  • Name
    trafficking protein particle complex 5
  • Synonyms
    4021401A16Rik, TRS31
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913932
    NCBI Gene: 66682
  • Alliance
    genome feature page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr8:3726477-3730921 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, 1.92 cM, cytoband A1
  • Mapping Data
    4 experiments
Strain
Comparison
more
  • SNPs within 2kb
    183 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913932
 protein coding gene Chr8:3726299-3731255 (+)
129S1/SvImJ ENSMUSG00200011673
 protein coding gene Chr8:547408-552274 (+)
A/J ENSMUSG00195008657
 protein coding gene Chr8:951565-956521 (+)
AKR/J ENSMUSG00220010351
 protein coding gene Chr8:678103-683059 (+)
BALB/cJ ENSMUSG00180004033
 protein coding gene Chr8:602041-606997 (+)
C3H/HeJ ENSMUSG00175007756
 protein coding gene Chr8:716655-721612 (+)
C57BL/6NJ ENSMUSG00215005342
 protein coding gene Chr8:631009-635965 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030781
 protein coding gene Chr8:545139-550051 (+)
CAST/EiJ ENSTCUG00005020219
 protein coding gene Chr8:697403-702356 (+)
CBA/J ENSMUSG00210010451
 protein coding gene Chr8:594224-599180 (+)
DBA/2J ENSMUSG00185003541
 protein coding gene Chr8:730277-735233 (+)
FVB/NJ ENSMUSG00205005472
 protein coding gene Chr8:664088-669045 (+)
JF1/MsJ ENSUMUG00000027532
 protein coding gene Chr8:684090-688956 (+)
LP/J ENSMUSG00230006323
 protein coding gene Chr8:2899865-2904821 (+)
NOD/ShiLtJ ENSMUSG00190010474
 protein coding gene Chr8:704285-709241 (+)
NZO/HlLtJ ENSMUSG00225015576
 protein coding gene Chr8:10765118-10770070 (+)
PWK/PhJ ENSLUMG00010009644
 protein coding gene Chr8:641271-646135 (+)
SPRET/EiJ ENSMSPG00010016043
 protein coding gene Chr8:614437-617970 (+)
WSB/EiJ ENSIUOG00005004410
 protein coding gene Chr8:638776-643728 (+)



Homology
more
  • Human Ortholog
    TRAPPC5, trafficking protein particle complex subunit 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TRAPPC5, trafficking protein particle complex subunit 5
  • Synonyms
    TRS31
  • Links
    NCBI Gene ID: 126003
    UniProt: Q8IUR0

  • Chr Location
    19p13.2; chr19:7680833-7687703 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    20
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66682 NCBI Gene Model | MGI Sequence Detail 4445 C57BL/6J ±  kb
transcript NM_025701 RefSeq | MGI Sequence Detail 2072 ZRU/MplStud  
polypeptide Q9CQA1 UniProt | EBI | MGI Sequence Detail 188 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000016616 trafficking protein particle complex subunit 5
    (term hierarchy)
  • InterPro Domains
    IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily
    IPR007194 Transport protein particle (TRAPP) component
    IPR016696 TRAPP I complex, subunit 5
Molecular
Reagents
less
  • All nucleic 9
    Genomic 2
    cDNA 7

    Microarray probesets 4
References
more
  • Summaries
    All 34
    Gene Ontology 9
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:320033 Kim JJ, et al., TRAPP Complexes in Secretion and Autophagy. Front Cell Dev Biol. 2016;4:20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory