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Tex12 Gene Detail
Summary
  • Symbol
    Tex12
  • Name
    testis expressed 12
  • Synonyms
    5730518K06Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913904
    NCBI Gene: 66654
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:50468448-50472568 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 27.75 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913904
 protein coding gene Chr9:50468119-50472625 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034779
 protein coding gene Chr9:49450820-49454776 (-)
A/J MGP_AJ_G0034760
 protein coding gene Chr9:47939848-47944325 (-)
AKR/J MGP_AKRJ_G0034688
 protein coding gene Chr9:48952193-48956313 (-)
BALB/cJ MGP_BALBcJ_G0034752
 protein coding gene Chr9:47667694-47672019 (-)
C3H/HeJ MGP_C3HHeJ_G0034462
 protein coding gene Chr9:49435252-49439389 (-)
C57BL/6NJ MGP_C57BL6NJ_G0035272
 protein coding gene Chr9:50828584-50832909 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0032185
 protein coding gene Chr9:47410311-47414179 (-)
CAST/EiJ MGP_CASTEiJ_G0033784
 protein coding gene Chr9:49383793-49388075 (-)
CBA/J MGP_CBAJ_G0034434
 protein coding gene Chr9:52636667-52645604 (-)
DBA/2J MGP_DBA2J_G0034593
 protein coding gene Chr9:47804464-47808694 (-)
FVB/NJ MGP_FVBNJ_G0034534
 protein coding gene Chr9:47021517-47025604 (-)
LP/J MGP_LPJ_G0034674
 protein coding gene Chr9:49809951-49814775 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0035293
 protein coding gene Chr9:48928672-48933723 (-)
PWK/PhJ MGP_PWKPhJ_G0033489
 protein coding gene Chr9:47780616-47785015 (-)
SPRET/EiJ MGP_SPRETEiJ_G0033324
 protein coding gene Chr9:49244136-49248191 (-)
WSB/EiJ MGP_WSBEiJ_G0033897
 protein coding gene Chr9:48933230-48937255 (-)



Homology
more
  • Human Ortholog
    TEX12, testis expressed 12
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TEX12, testis expressed 12
  • Links
    NCBI Gene ID: 56158
    neXtProt AC: NX_Q9BXU0
    UniProt: Q9BXU0

  • Chr Location
    11q23.1; chr11:112167372-112172556 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotypes from 1 allele in 1 genetic background
    5 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knockout allele exhibit infertility associated with failure of crossover events during meiosis.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    723
  • Tissues
    4
  • cDNA Data
    14
  • Literature Summary
    7
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 66654 NCBI Gene Model | MGI Sequence Detail 4121 C57BL/6J ±  kb
    transcript NM_025687 RefSeq | MGI Sequence Detail 647 Not Specified  
    polypeptide Q9CR81 UniProt | EBI | MGI Sequence Detail 123 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 17
      cDNA 14
      Primer pair 3

      Microarray probesets 4
    References
    more
    • Summaries
      All 34
      Developmental Gene Expression 7
      Gene Ontology 5
      Phenotypes 5
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:285969 Liu H, et al., SCRE serves as a unique synaptonemal complex fastener and is essential for progression of meiosis prophase I in mice. Nucleic Acids Res. 2019 Jun 20;47(11):5670-5683
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    04/16/2024
    MGI 6.23     		The Jackson Laboratory