Tceanc2 MGI Mouse Gene Detail - MGI:1913776 - transcription elongation factor A (SII) N-terminal and central domain containing 2

Symbol

Tceanc2
Name

transcription elongation factor A (SII) N-terminal and central domain containing 2
Synonyms

2210010B22Rik, 2210012G02Rik, 6330404A07Rik, Tdeanc2

Feature Type

protein coding gene
IDs

MGI:1913776
NCBI Gene: 66526
Alliance

gene page
Transcription Start Sites

12 TSS

Sequence Map

Chr4:106991352-107035563 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

Genetic Map

Chromosome 4, 50.07 cM, cytoband C7
Mapping Data

3 experiments

SNPs within 2kb

1121 from dbSNP Build 142
Strain Annotations

18

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1913776	protein coding gene	Chr4:106991352-107036313 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0028532	protein coding gene	Chr4:107805224-107853201 (-)
A/J	MGP_AJ_G0028495	protein coding gene	Chr4:103942542-103987866 (-)
AKR/J	MGP_AKRJ_G0028442	protein coding gene	Chr4:106485573-106532527 (-)
BALB/cJ	MGP_BALBcJ_G0028514	protein coding gene	Chr4:104133465-104179713 (-)
C3H/HeJ	MGP_C3HHeJ_G0028228	protein coding gene	Chr4:107234056-107281118 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0028954	protein coding gene	Chr4:111684333-111729274 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0026245	protein coding gene	Chr4:99222375-99266305 (-)
CAST/EiJ	MGP_CASTEiJ_G0027664	protein coding gene	Chr4:105047085-105095169 (-)
CBA/J	MGP_CBAJ_G0028197	protein coding gene	Chr4:115300056-115354103 (-)
DBA/2J	MGP_DBA2J_G0028345	protein coding gene	Chr4:103559362-103608816 (-)
FVB/NJ	MGP_FVBNJ_G0028313	protein coding gene	Chr4:102432029-102477164 (-)
LP/J	MGP_LPJ_G0028446	protein coding gene	Chr4:108004527-108051928 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0028339	protein coding gene	Chr4:120599552-120647199 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0028990	protein coding gene	Chr4:106722612-106776395 (-)
PWK/PhJ	MGP_PWKPhJ_G0027390	protein coding gene	Chr4:101806283-101852983 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0027214	protein coding gene	Chr4:104122434-104169485 (-)
WSB/EiJ	MGP_WSBEiJ_G0027745	protein coding gene	Chr4:106905789-106951860 (-)

Human Ortholog

TCEANC2, transcription elongation factor A N-terminal and central domain containing 2

Vertebrate Orthologs

3

Vertebrate Orthology Source

Alliance of Genome Resources

Human Ortholog

TCEANC2, transcription elongation factor A N-terminal and central domain containing 2
Synonyms

C1orf83
Links

HGNC:26494

NCBI Gene ID: 127428

UniProt: Q96MN5
Chr Location

1p32.3; chr1:54053584-54112520 (+) GRCh38

MGI Vertebrate Homology

Tceanc2 stringent orthology
1 human;1 mouse;1 rat;1 zebrafish
HCOP

vertebrate homology predictions: TCEANC2
Gene Tree

Tceanc2

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Phenotype Summary

10 phenotypes from 1 allele in 1 genetic background
16 phenotype references

Phenotype Overview

Blue squares indicate phenotypes directly attributed to mutations/alleles of this gene.

adipose tissue	behavior/neurological	cardiovascular system	cellular	craniofacial	digestive/alimentary system	embryo	endocrine/exocrine glands	growth/size/body	hearing/vestibular/ear	hematopoietic system	homeostasis/metabolism	integument	immune system	limbs/digits/tail	liver/biliary system	mortality/aging	muscle	nervous system	pigmentation	renal/urinary system	reproductive system	respiratory system	skeleton	taste/olfaction	neoplasm	vision/eye

Click cells to view annotations.

All Mutations and Alleles

17
Chemically induced (other)

2
Endonuclease-mediated

1
Gene trapped

10
Radiation induced

1
Targeted

3
Genomic Mutations

4 involving Tceanc2
Find Mice (IMSR)

24 strains or lines available
Comparison Matrix

Gene Expression + Phenotype

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All GO Annotations

6
GO References

4

Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

carbohydrate derivative metabolism	cell differentiation	cell population proliferation	cellular component organization	DNA-templated transcription	establishment of localization	homeostatic process	immune system process	lipid metabolic process	programmed cell death	protein metabolic process	response to stimulus	signaling	system development

Cellular Component

cell projection	cytoplasmic vesicle	cytoskeleton	cytosol	endoplasmic reticulum	endosome	extracellular region	Golgi apparatus	mitochondrion	membraneless organelle	nucleus	organelle envelope	organelle lumen	plasma membrane	protein-containing complex	synapse	vacuole

Click cells to view annotations.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

Assay Results

749
Tissues

29
cDNA Data

17
Literature Summary

1

Images

Tissue x Stage Matrix

Comparison Matrix

Gene Expression + Phenotype

Other Mouse Links

Allen Institute

GEO

Expression Atlas
Other Vertebrate Links

Xenbase tceanc2

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All Sequences

60
RefSeq

4
UniProt

4
CCDS

CCDS18431.1

Ensembl

ENSMUSG00000028619 (Evidence)
NCBI Gene

66526

			Length	Strain/Species	Flank
genomic	66526	NCBI Gene Model \| MGI Sequence Detail	44212	C57BL/6J	± kb
transcript	NM_025617	RefSeq \| MGI Sequence Detail	6243	Not Specified
polypeptide	Q8R2M0	UniProt \| EBI \| MGI Sequence Detail	207	Not Applicable

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UniProt

4 Sequences
Protein Ontology

PR:000030203 transcription elongation factor A N-terminal and central domain-containing protein 2

(term hierarchy)
InterPro Domains

IPR035441 TFIIS/LEDGF domain superfamily

IPR003618 Transcription elongation factor S-II, central domain

IPR036575 Transcription elongation factor S-II, central domain superfamily

IPR003617 Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type

IPR017923 Transcription factor IIS, N-terminal

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All nucleic 17

cDNA 17

Microarray probesets 6

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MGI:1918004, MGI:1919549, MGI:2140429

Summaries

All 42

Developmental Gene Expression 1

Gene Ontology 4

Phenotypes 16
Earliest

J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
Latest

J:201630 Ryder E, et al., Molecular characterization of mutant mouse strains generated from the EUCOMM/KOMP-CSD ES cell resource. Mamm Genome. 2013 Aug;24(7-8):286-94

TSS for Tceanc2:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr42675	Chr4:107036513-107036523 (-)	-955 bp
Tssr42674	Chr4:107035557-107035570 (-)	-1 bp
Tssr42673	Chr4:107035537-107035552 (-)	18 bp
Tssr42672	Chr4:107035493-107035535 (-)	49 bp
Tssr42671	Chr4:107035003-107035045 (-)	539 bp
Tssr42670	Chr4:107034979-107035000 (-)	573 bp
Tssr42669	Chr4:107034953-107034969 (-)	602 bp
Tssr42668	Chr4:107034925-107034932 (-)	634 bp
Tssr42667	Chr4:107034910-107034920 (-)	648 bp
Tssr42666	Chr4:107034896-107034909 (-)	660 bp
Tssr42665	Chr4:107034820-107034831 (-)	737 bp
Tssr42664	Chr4:106992244-106992247 (-)	43,317 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 01/20/2026 MGI 6.24