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Ccdc82 Gene Detail
Summary
  • Symbol
    Ccdc82
  • Name
    coiled-coil domain containing 82
  • Synonyms
    2310043N13Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1913646
    NCBI Gene: 66396
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:13246573-13292867 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, Syntenic
Strain
Comparison
more
  • SNPs within 2kb
    47 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1913646
 protein coding gene Chr9:13246536-13292867 (+)
129S1/SvImJ MGP_129S1SvImJ_G0034341
 protein coding gene Chr9:10243952-10285780 (+)
A/J MGP_AJ_G0034319
 protein coding gene Chr9:10216556-10260827 (+)
AKR/J MGP_AKRJ_G0034247
 protein coding gene Chr9:10191864-10234807 (+)
BALB/cJ MGP_BALBcJ_G0034313
 protein coding gene Chr9:9972005-10012966 (+)
C3H/HeJ MGP_C3HHeJ_G0034024
 protein coding gene Chr9:10477974-10516792 (+)
C57BL/6NJ MGP_C57BL6NJ_G0034835
 protein coding gene Chr9:10583509-10624494 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0031773
 protein coding gene Chr9:9577115-9616745 (+)
CAST/EiJ MGP_CASTEiJ_G0033351
 protein coding gene Chr9:10312553-10357281 (+)
CBA/J MGP_CBAJ_G0033997
 protein coding gene Chr9:11056629-11095621 (+)
DBA/2J MGP_DBA2J_G0034154
 protein coding gene Chr9:10089821-10129723 (+)
FVB/NJ MGP_FVBNJ_G0034099
 protein coding gene Chr9:9718182-9760167 (+)
LP/J MGP_LPJ_G0034240
 protein coding gene Chr9:10298110-10337935 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034143
 protein coding gene Chr9:12179063-12224118 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034854
 protein coding gene Chr9:10227609-10264061 (+)
PWK/PhJ MGP_PWKPhJ_G0033057
 protein coding gene Chr9:10163406-10206458 (+)
SPRET/EiJ MGP_SPRETEiJ_G0032893
 protein coding gene Chr9:10298556-10337699 (+)
WSB/EiJ MGP_WSBEiJ_G0033467
 protein coding gene Chr9:10052128-10094323 (+)



Homology
more
  • Human Ortholog
    CCDC82, coiled-coil domain containing 82
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC82, coiled-coil domain containing 82
  • Synonyms
    HSPC048
  • Links
    NCBI Gene ID: 79780
    neXtProt AC: NX_Q8N4S0
    UniProt: Q8N4S0

  • Chr Location
    11q21; chr11:96349241-96389956 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    9
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66396 NCBI Gene Model | MGI Sequence Detail 46295 C57BL/6J ±  kb
transcript NM_025534 RefSeq | MGI Sequence Detail 4661 ZRU/MplStud  
polypeptide Q6PG04 UniProt | EBI | MGI Sequence Detail 518 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 9

    Microarray probesets 2
References
more
  • Summaries
    All 19
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory