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AA545190 Gene Detail
Summary
  • Symbol
    AA545190
  • Name
    EST AA545190
Location &
Maps
more
  • Sequence Map
    Chr6:10971467-10974377 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 4.86 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    163 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1889333
 lncRNA gene Chr6:10971467-10979658 (-)
129S1/SvImJ ENSMUSG00200002200
 lncRNA gene Chr6:7988472-7996548 (-)
A/J ENSMUSG00195002190
 lncRNA gene Chr6:7917756-7925834 (-)
AKR/J ENSMUSG00220021408
 lncRNA gene Chr6:7526225-7534303 (-)
BALB/cJ ENSMUSG00180001595
 lncRNA gene Chr6:8064883-8072963 (-)
C3H/HeJ ENSMUSG00175007534
 lncRNA gene Chr6:7904933-7913013 (-)
C57BL/6NJ ENSMUSG00215014152
 lncRNA gene Chr6:8035123-8043202 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0006284
 lincRNA gene Chr6:7201573-7209772 (-)
CAST/EiJ ENSTCUG00005027409
 lncRNA gene Chr6:7855439-7863520 (-)
CBA/J ENSMUSG00210021510
 lncRNA gene Chr6:7836624-7844702 (-)
DBA/2J ENSMUSG00185026288
 lncRNA gene Chr6:8003470-8011548 (-)
FVB/NJ ENSMUSG00205016890
 lncRNA gene Chr6:8002763-8010839 (-)
JF1/MsJ ENSUMUG00000013302
 lncRNA gene Chr6:7949729-7957775 (-)
LP/J ENSMUSG00230017898
 lncRNA gene Chr6:9007142-9015218 (-)
NOD/ShiLtJ ENSMUSG00190017199
 lncRNA gene Chr6:7743270-7751346 (-)
NZO/HlLtJ ENSMUSG00225006192
 lncRNA gene Chr6:10850629-10858705 (-)
PWK/PhJ ENSLUMG00010024950
 lncRNA gene Chr6:7709555-7717564 (-)
SPRET/EiJ ENSMSPG00010003126
 lncRNA gene Chr6:7770685-7786115 (-)
WSB/EiJ ENSIUOG00005004418
 lncRNA gene Chr6:8082558-8090640 (-)



Homology
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Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    18
Sequences &
Gene Models
less
  • All Sequences
    33
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 57866 NCBI Gene Model | MGI Sequence Detail 2911 C57BL/6J ±  kb
transcript NR_033776 RefSeq | MGI Sequence Detail 1035 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 2
References
more
  • Summaries
    All 14
  • Earliest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory