About   Help   FAQ
Krtap5-4 Gene Detail
Summary
  • Symbol
    Krtap5-4
  • Name
    keratin associated protein 5-4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1354758
    NCBI Gene: 50775
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:141857239-141858240 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 87.87 cM, cytoband F5
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1354758
 protein coding gene Chr7:141857239-141858331 (+)
129S1/SvImJ ENSMUSG00200041838
 protein coding gene Chr7:128423628-128424673 (+)
A/J ENSMUSG00195033197
 protein coding gene Chr7:132905666-132906711 (+)
AKR/J ENSMUSG00220028230
 protein coding gene Chr7:126387892-126388937 (+)
BALB/cJ ENSMUSG00180037621
 protein coding gene Chr7:129591694-129592735 (+)
C3H/HeJ ENSMUSG00175041661
 protein coding gene Chr7:130326587-130327632 (+)
C57BL/6NJ ENSMUSG00215044252
 protein coding gene Chr7:129592956-129594001 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030718
 protein coding gene Chr7:144499296-144500375 (+)
CAST/EiJ no annotation
CBA/J ENSMUSG00210027073
 protein coding gene Chr7:130084515-130085560 (+)
DBA/2J ENSMUSG00185015091
 protein coding gene Chr7:134363104-134364149 (+)
FVB/NJ ENSMUSG00205036739
 protein coding gene Chr7:130005233-130006278 (+)
JF1/MsJ no annotation
LP/J ENSMUSG00230041539
 protein coding gene Chr7:140526466-140527511 (+)
NOD/ShiLtJ ENSMUSG00190024121
 protein coding gene Chr7:130192008-130193053 (+)
NZO/HlLtJ ENSMUSG00225052098
 protein coding gene Chr7:138735385-138736430 (+)
PWK/PhJ no annotation
SPRET/EiJ ENSMSPG00010038063
 protein coding gene Chr7:130029790-130030782 (+)
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    KRTAP5-10, keratin associated protein 5-10
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP5-10, keratin associated protein 5-10
  • Synonyms
    KRTAP5.10
  • Links
    NCBI Gene ID: 387273
    UniProt: Q6L8G5

  • Chr Location
    11q13.4; chr11:71565563-71566735 (+)  GRCh38
  • Human Ortholog
    KRTAP5-2, keratin associated protein 5-2
  • Synonyms
    KRTAP5.2, KRTAP5-8
  • Links
    NCBI Gene ID: 440021
    UniProt: Q701N4

  • Chr Location
    11p15.5; chr11:1597177-1598294 (-)  GRCh38
  • Human Ortholog
    KRTAP5-7, keratin associated protein 5-7
  • Synonyms
    KRTAP5-3, KRTAP5.7
  • Links
    NCBI Gene ID: 440050
    UniProt: Q6L8G8

  • Chr Location
    11q13.4; chr11:71527267-71528669 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    3
  • Endonuclease-mediated
    2
  • Radiation induced
    1
  • Genomic Mutations
    1 involving Krtap5-4
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    11 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    600
  • Tissues
    1
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 50775 NCBI Gene Model | MGI Sequence Detail 1002 C57BL/6J ±  kb
transcript NM_015809 RefSeq | MGI Sequence Detail 1002 C57BL/6  
polypeptide Q62220 UniProt | EBI | MGI Sequence Detail 223 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 7
    Genomic 3
    cDNA 3
    Primer pair 1

    Microarray probesets 3
References
more
  • Summaries
    All 22
    Developmental Gene Expression 1
    Phenotypes 4
  • Earliest
    J:19083 Wood L, et al., Serine-rich ultra high sulfur protein gene expression in murine hair and skin during the hair cycle [published erratum appears in J Biol Chem 1991 Feb 25;266(6):4024]. J Biol Chem. 1990 Dec 5;265(34):21375-80
  • Latest
    J:150086 Kiso M, et al., The disruption of Sox21-mediated hair shaft cuticle differentiation causes cyclic alopecia in mice. Proc Natl Acad Sci U S A. 2009 Jun 9;106(23):9292-7
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory