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Gpr162 Gene Detail
Summary
  • Symbol
    Gpr162
  • Name
    G protein-coupled receptor 162
  • Synonyms
    A-2, Grca
  • Feature Type
    protein coding gene
  • IDs
    MGI:1315214
    NCBI Gene: 14788
  • Alliance
    gene page
  • Transcription Start Sites
    17 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:124835407-124840946 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 59.17 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1315214
 protein coding gene Chr6:124835407-124840946 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031274
 protein coding gene Chr6:128169043-128174506 (-)
A/J MGP_AJ_G0031244
 protein coding gene Chr6:123344664-123350128 (-)
AKR/J MGP_AKRJ_G0031172
 protein coding gene Chr6:126710180-126715669 (-)
BALB/cJ MGP_BALBcJ_G0031252
 protein coding gene Chr6:122945037-122950577 (-)
C3H/HeJ MGP_C3HHeJ_G0030975
 protein coding gene Chr6:126758668-126765129 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031708
 protein coding gene Chr6:131549395-131554931 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0028858
 protein coding gene Chr6:120554527-120560047 (-)
CAST/EiJ MGP_CASTEiJ_G0030356
 protein coding gene Chr6:126964261-126969789 (-)
CBA/J MGP_CBAJ_G0030936
 protein coding gene Chr6:136580365-136585932 (-)
DBA/2J MGP_DBA2J_G0031092
 protein coding gene Chr6:122271828-122277223 (-)
FVB/NJ MGP_FVBNJ_G0031042
 protein coding gene Chr6:121175013-121180551 (-)
LP/J MGP_LPJ_G0031172
 protein coding gene Chr6:128335971-128341502 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031080
 protein coding gene Chr6:140640339-140645877 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031743
 protein coding gene Chr6:126602806-126608343 (-)
PWK/PhJ MGP_PWKPhJ_G0030071
 protein coding gene Chr6:120502903-120508407 (-)
SPRET/EiJ MGP_SPRETEiJ_G0029900
 protein coding gene Chr6:124687540-124693037 (-)
WSB/EiJ MGP_WSBEiJ_G0030441
 protein coding gene Chr6:126964433-126969970 (-)



Homology
more
  • Human Ortholog
    GPR162, G protein-coupled receptor 162
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GPR162, G protein-coupled receptor 162
  • Synonyms
    A-2, GRCA
  • Links
    NCBI Gene ID: 27239
    neXtProt AC: NX_Q16538
    UniProt: Q16538

  • Chr Location
    12p13.31; chr12:6821797-6827418 (+)  GRCh38.p7
Human Diseases
less
  • Mutations/Alleles
    1 with disease annotations
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    23 phenotypes from multigenic genotypes
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    8
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    825
  • Tissues
    15
  • cDNA Data
    27
  • Literature Summary
    2
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 14788 NCBI Gene Model | MGI Sequence Detail 5540 C57BL/6J ±  kb
transcript NM_001409840 RefSeq | MGI Sequence Detail 3277 C57BL/6  
polypeptide Q3UN16 UniProt | EBI | MGI Sequence Detail 588 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 28
    Genomic 1
    cDNA 27

    Microarray probesets 2
Other
Accession IDs
less
MGI:3039579
References
more
  • Summaries
    All 26
    Developmental Gene Expression 2
    Diseases 1
    Gene Ontology 2
    Phenotypes 4
  • Earliest
    J:45711 Ansari-Lari MA, et al., Comparative sequence analysis of a gene-rich cluster at human chromosome 12p13 and its syntenic region in mouse chromosome 6. Genome Res. 1998 Jan;8(1):29-40
  • Latest
    J:302395 Shah K, et al., A chromatin modulator sustains self-renewal and enables differentiation of postnatal neural stem and progenitor cells. J Mol Cell Biol. 2020 Jan 22;12(1):4-16
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
03/14/2023
MGI 6.22 		The Jackson Laboratory