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Scin Gene Detail
Summary
  • Symbol
    Scin
  • Name
    scinderin
  • Synonyms
    adseverin
  • Feature Type
    protein coding gene
  • IDs
    MGI:1306794
    NCBI Gene: 20259
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:40109768-40184227 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 18.06 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    2287 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1306794
 protein coding gene Chr12:40109768-40184227 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019700
 protein coding gene Chr12:38465372-38542804 (-)
A/J MGP_AJ_G0019666
 protein coding gene Chr12:37204018-37280554 (-)
AKR/J MGP_AKRJ_G0019637
 protein coding gene Chr12:38321407-38400812 (-)
BALB/cJ MGP_BALBcJ_G0019644
 protein coding gene Chr12:37419153-37496234 (-)
C3H/HeJ MGP_C3HHeJ_G0019448
 protein coding gene Chr12:38266893-38340774 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020091
 protein coding gene Chr12:39617129-39697106 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017716
 protein coding gene Chr12:36345240-36424061 (-)
CAST/EiJ MGP_CASTEiJ_G0019001
 protein coding gene Chr12:33443961-33533572 (-)
CBA/J MGP_CBAJ_G0019420
 protein coding gene Chr12:40946201-41041627 (-)
DBA/2J MGP_DBA2J_G0019533
 protein coding gene Chr12:37066720-37140532 (-)
FVB/NJ MGP_FVBNJ_G0019522
 protein coding gene Chr12:36696915-36769884 (-)
LP/J MGP_LPJ_G0019603
 protein coding gene Chr12:38452510-38528693 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019558
 protein coding gene Chr12:41110637-41199922 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020131
 protein coding gene Chr12:37889716-37968474 (-)
PWK/PhJ MGP_PWKPhJ_G0018768
 protein coding gene Chr12:31740434-31819289 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018558
 protein coding gene Chr12:32541587-32625693 (-)
WSB/EiJ MGP_WSBEiJ_G0019051
 protein coding gene Chr12:38189616-38270653 (-)



Homology
more
  • Human Ortholog
    SCIN, scinderin
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SCIN, scinderin
  • Links
    NCBI Gene ID: 85477
    neXtProt AC: NX_Q9Y6U3
    UniProt: Q9Y6U3

  • Chr Location
    7p21.3; chr7:12570577-12660182 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 2 alleles in 2 genetic backgrounds
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a conditional allele knocked-out in osteoclasts exhibit impaired osteoclast differentiation and reduced peridontal disease-mediated bone loss.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    28
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    783
  • Tissues
    49
  • cDNA Data
    39
  • Literature Summary
    5
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 20259 NCBI Gene Model | MGI Sequence Detail 74460 C57BL/6J ±  kb
    transcript NM_001146196 RefSeq | MGI Sequence Detail 3008 C57BL/6  
    polypeptide Q60604 UniProt | EBI | MGI Sequence Detail 715 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 39
      cDNA 39

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:2145036
    References
    more
    • Summaries
      All 46
      Developmental Gene Expression 5
      Gene Ontology 8
      Phenotypes 10
    • Earliest
      J:48640 Robbens J, et al., Murine adseverin (D5), a novel member of the gelsolin family, and murine adseverin are induced by interleukin-9 in T-helper lymphocytes. Mol Cell Biol. 1998 Aug;18(8):4589-96
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    10/01/2024
    MGI 6.24     		The Jackson Laboratory