Lt1 Pseudogene Detail

Summary

• Symbol
  Lt1
• Name
  lurcher transcript 1

• Feature Type
  pseudogene
• IDs
  MGI:1100855
  NCBI Gene: 16991
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr6:64873937-64876425 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 6, Syntenic
• Mapping Data
  2 experiments

Strain
Comparison

• SNPs within 2kb
  95 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1100855	pseudogene	Chr6:64873937-64876425 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  1

• NCBI Gene
  16991

Representative Sequences			Length	Strain/Species
genomic	16991	NCBI Gene Model | MGI Sequence Detail	2489	C57BL/6J
transcript	U89356	GenBank | ENA | DDBJ | MGI Sequence Detail	667	Not Specified

Molecular
Reagents

• All nucleic 8

  Genomic 7

  cDNA 1

References

• Summaries
  All 7
• Earliest
  J:42057 De Jager PL, et al., An approximately 1.2-Mb bacterial artificial chromosome contig refines the genetic and physical maps of the lurcher locus on mouse chromosome 6 [letter]. Genome Res. 1997 Jul;7(7):736-46
• Latest
  J:104903 Martin LA, et al., A relationship between cerebellar Purkinje cells and spatial working memory demonstrated in a lurcher/chimera mouse model system. Genes Brain Behav. 2004 Jun;3(3):158-66