Cycs-ps3 Pseudogene Detail

Summary

• Symbol
  Cycs-ps3
• Name
  cytochrome c, pseudogene 3

• Feature Type
  pseudogene
• IDs
  MGI:109498
  NCBI Gene: 13066
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr13:94190351-94190896 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 49.01 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_109498	pseudogene	Chr13:94190229-94191187 (+)
129S1/SvImJ	ENSMUSG00200009065	pseudogene	Chr13:88691962-88692507 (+)
A/J	ENSMUSG00195024724	pseudogene	Chr13:89193161-89193706 (+)
AKR/J	ENSMUSG00220013964	pseudogene	Chr13:87648029-87648574 (+)
BALB/cJ	ENSMUSG00180016928	pseudogene	Chr13:89728362-89728907 (+)
C3H/HeJ	ENSMUSG00175023893	pseudogene	Chr13:89892205-89892750 (+)
C57BL/6NJ	ENSMUSG00215003043	pseudogene	Chr13:89789835-89790380 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	ENSTCUG00005009892	pseudogene	Chr13:88979726-88980273 (+)
CBA/J	ENSMUSG00210024494	pseudogene	Chr13:89213916-89214461 (+)
DBA/2J	ENSMUSG00185019710	pseudogene	Chr13:92874624-92875169 (+)
FVB/NJ	ENSMUSG00205008411	pseudogene	Chr13:88678861-88679406 (+)
JF1/MsJ	ENSUMUG00000030822	pseudogene	Chr13:92550254-92550781 (+)
LP/J	ENSMUSG00230037841	pseudogene	Chr13:102892616-102893161 (+)
NOD/ShiLtJ	ENSMUSG00190019579	pseudogene	Chr13:89572243-89572788 (+)
NZO/HlLtJ	ENSMUSG00225034097	pseudogene	Chr13:95406277-95406822 (+)
PWK/PhJ	ENSLUMG00010011809	pseudogene	Chr13:88660331-88660857 (+)
SPRET/EiJ	ENSMSPG00010006891	pseudogene	Chr13:89905800-89906339 (+)
WSB/EiJ	ENSIUOG00005032038	pseudogene	Chr13:88585479-88586027 (+)

Homology

• Gene Tree
  Cycs-ps3
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Cycs-ps3
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000114174 (Evidence)
• NCBI Gene
  13066

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000114174	Ensembl Gene Model | MGI Sequence Detail	546	C57BL/6J
transcript	ENSMUST00000223240	Ensembl | MGI Sequence Detail	321	Not Applicable

Molecular
Reagents

• All nucleic 1

  Genomic 1

Other
Accession IDs

MGD-MRK-39497

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
• Latest
  J:38101 Limbach KJ, et al., Characterization of a mouse somatic cytochrome c gene and three cytochrome c pseudogenes. Nucleic Acids Res. 1985 Jan 25;13(2):617-30