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Snrp1c-ps2 Pseudogene Detail
Summary
  • Symbol
    Snrp1c-ps2
  • Name
    U1 small nuclear ribonucleoprotein 1C, pseudogene 2
  • Synonyms
    mC-[y]22
Location &
Maps
more
  • Sequence Map
    Chr13:24107783-24108147 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 10.00 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    158 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_109487
 pseudogene Chr13:24107675-24108147 (-)
129S1/SvImJ ENSMUSG00200033011
 pseudogene Chr13:21238292-21238656 (-)
A/J ENSMUSG00195040633
 pseudogene Chr13:20387476-20387840 (-)
AKR/J ENSMUSG00220013242
 pseudogene Chr13:20208605-20208969 (-)
BALB/cJ ENSMUSG00180024149
 pseudogene Chr13:20705987-20706351 (-)
C3H/HeJ ENSMUSG00175034359
 pseudogene Chr13:20712190-20712554 (-)
C57BL/6NJ ENSMUSG00215013699
 pseudogene Chr13:20865026-20865390 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009836
 pseudogene Chr13:19752910-19753275 (-)
CAST/EiJ ENSTCUG00005010678
 pseudogene Chr13:20886134-20886498 (-)
CBA/J ENSMUSG00210027778
 pseudogene Chr13:20667471-20667835 (-)
DBA/2J ENSMUSG00185021669
 pseudogene Chr13:21489472-21489836 (-)
FVB/NJ ENSMUSG00205036552
 pseudogene Chr13:20507893-20508257 (-)
JF1/MsJ ENSUMUG00000022848
 pseudogene Chr13:21154380-21154744 (-)
LP/J ENSMUSG00230020534
 pseudogene Chr13:30813658-30814022 (-)
NOD/ShiLtJ ENSMUSG00190036105
 pseudogene Chr13:20484935-20485299 (-)
NZO/HlLtJ ENSMUSG00225045500
 pseudogene Chr13:24601890-24602254 (-)
PWK/PhJ ENSLUMG00010031637
 pseudogene Chr13:20045764-20046128 (-)
SPRET/EiJ ENSMSPG00010020673
 pseudogene Chr13:19822988-19823352 (-)
WSB/EiJ ENSIUOG00005036519
 pseudogene Chr13:20009455-20009819 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000082558 Ensembl Gene Model | MGI Sequence Detail 365 C57BL/6J ±  kb
transcript ENSMUST00000120976 Ensembl | MGI Sequence Detail 365 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 2

    Microarray probesets 1
Other
Accession IDs
less
MGD-MRK-39486
References
more
  • Summaries
    All 11
    Phenotypes 3
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:37896 Nelissen RL, et al., Cloning and characterization of two processed pseudogenes and the cDNA for the murine U1 snRNP-specific protein C. Gene. 1997 Jan 15;184(2):273-8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory