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Ifna-ps1 Pseudogene Detail
Summary
  • Symbol
    Ifna-ps1
  • Name
    interferon alpha gene, pseudogene 1
  • Synonyms
    Ifa-ps1, Mu IFN-alpha 41
Location &
Maps
more
  • Sequence Map
    Chr4:88497124-88498810 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 41.99 cM
Strain
Comparison
more
  • SNPs within 2kb
    109 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_107669
 pseudogene Chr4:88497124-88498811 (-)
129S1/SvImJ ENSMUSG00200010557
 pseudogene Chr4:83494761-83496448 (-)
A/J ENSMUSG00195009886
 pseudogene Chr4:84053442-84055129 (-)
AKR/J ENSMUSG00220019816
 pseudogene Chr4:83436326-83438013 (-)
BALB/cJ ENSMUSG00180006344
 pseudogene Chr4:83009205-83010892 (-)
C3H/HeJ ENSMUSG00175007871
 pseudogene Chr4:83970322-83972009 (-)
C57BL/6NJ ENSMUSG00215022336
 pseudogene Chr4:83870623-83872310 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037335
 pseudogene Chr4:81366861-81368562 (-)
CAST/EiJ ENSTCUG00005019317
 pseudogene Chr4:83314169-83315857 (-)
CBA/J ENSMUSG00210016474
 pseudogene Chr4:83545344-83547031 (-)
DBA/2J ENSMUSG00185002969
 pseudogene Chr4:84143720-84145407 (-)
FVB/NJ ENSMUSG00205013719
 pseudogene Chr4:82387885-82389572 (-)
JF1/MsJ ENSUMUG00000002985
 pseudogene Chr4:84374820-84376508 (-)
LP/J ENSMUSG00230018436
 pseudogene Chr4:87564993-87566680 (-)
NOD/ShiLtJ ENSMUSG00190017599
 pseudogene Chr4:82950601-82952288 (-)
NZO/HlLtJ ENSMUSG00225003898
 pseudogene Chr4:92682911-92684598 (-)
PWK/PhJ ENSLUMG00010003485
 pseudogene Chr4:82224956-82226641 (-)
SPRET/EiJ ENSMSPG00010015887
 pseudogene Chr4:83993606-83995298 (-)
WSB/EiJ ENSIUOG00005012686
 pseudogene Chr4:83344137-83345824 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    2
  • Radiation induced
    1
  • Genomic Mutations
    5 involving Ifna-ps1
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100416153 NCBI Gene Model | MGI Sequence Detail 1687 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 2
Other
Accession IDs
less
MGD-MRK-18772, MGD-MRK-36244, MGI:3650007
References
more
  • Summaries
    All 13
    Phenotypes 4
  • Earliest
    J:20801 Le Roscouet D, et al., Structure of a murine alpha interferon pseudogene with a repetitive R-type sequence in the 3' flanking region. Mol Cell Biol. 1985 Jun;5(6):1343-8
  • Latest
    J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory