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Cd63-ps Pseudogene Detail
Summary
  • Symbol
    Cd63-ps
  • Name
    CD63 antigen, pseudogene
  • Synonyms
    Cd63-rs1
  • Feature Type
    pseudogene
  • IDs
    MGI:105972
    NCBI Gene: 626721
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:50267862-50268578 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 18, 27.24 cM
  • Mapping Data
    7 experiments
Strain
Comparison
more
  • SNPs within 2kb
    68 from dbSNP Build 142
  • Strain Annotations
    7
  • RFLP
    2
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_105972
 pseudogene Chr18:50267796-50268667 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039686
 pseudogene Chr18:49156922-49158405 (+)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0040216
 pseudogene Chr18:50800837-50801711 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036826
 pseudogene Chr10:121274086-121276849 (+)
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0039439
 pseudogene Chr18:46492082-46494661 (+)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0040317
 pseudogene Chr18:48582805-48587536 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0037834
 pseudogene Chr10:130307484-130311481 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    11
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000085939 Ensembl Gene Model | MGI Sequence Detail 717 C57BL/6J ±  kb
transcript ENSMUST00000154992 Ensembl | MGI Sequence Detail 717 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 1
    Other 1
Other
Accession IDs
less
MGD-MRK-33651, MGI:3647076
References
more
  • Summaries
    All 12
    Phenotypes 1
  • Earliest
    J:29546 Seldin MF, et al., Mapping of the genes for four members of the transmembrane 4 superfamily: mouse Cd9, Cd63, Cd81, and Cd82. Immunogenetics. 1995;42(5):422-5
  • Latest
    J:327181 Lewis MA, et al., Identification and characterisation of spontaneous mutations causing deafness from a targeted knockout programme. BMC Biol. 2022 Mar 17;20(1):67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory