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Rab22a Gene Detail
Summary
  • Symbol
    Rab22a
  • Name
    RAB22A, member RAS oncogene family
  • Synonyms
    3732413A17Rik, E130120E14Rik, Rab22
  • Feature Type
    protein coding gene
  • IDs
    MGI:105072
    NCBI Gene: 19334
  • Alliance
    gene page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:173501638-173543975 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 97.26 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    227 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_105072
 protein coding gene Chr2:173501553-173549136 (+)
129S1/SvImJ MGP_129S1SvImJ_G0026959
 protein coding gene Chr2:179962791-180011333 (+)
A/J MGP_AJ_G0026926
 protein coding gene Chr2:172383311-172430688 (+)
AKR/J MGP_AKRJ_G0026897
 protein coding gene Chr2:177581980-177634547 (+)
BALB/cJ MGP_BALBcJ_G0026935
 protein coding gene Chr2:172786836-172833822 (+)
C3H/HeJ MGP_C3HHeJ_G0026677
 protein coding gene Chr2:177966220-178014216 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027382
 protein coding gene Chr2:185140278-185188779 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024752
 protein coding gene Chr2:165614460-165662898 (+)
CAST/EiJ MGP_CASTEiJ_G0026136
 protein coding gene Chr2:178685976-178734411 (+)
CBA/J MGP_CBAJ_G0026654
 protein coding gene Chr2:192054101-192106152 (+)
DBA/2J MGP_DBA2J_G0026792
 protein coding gene Chr2:171473992-171522075 (+)
FVB/NJ MGP_FVBNJ_G0026758
 protein coding gene Chr2:170109823-170158124 (+)
LP/J MGP_LPJ_G0026893
 protein coding gene Chr2:179880294-179928369 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026777
 protein coding gene Chr2:194970291-195021351 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027439
 protein coding gene Chr2:177600012-177651435 (+)
PWK/PhJ MGP_PWKPhJ_G0025872
 protein coding gene Chr2:171286924-171335072 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025672
 protein coding gene Chr2:176632595-176682460 (+)
WSB/EiJ MGP_WSBEiJ_G0026208
 protein coding gene Chr2:178549437-178599193 (+)



Homology
more
  • Human Ortholog
    RAB22A, RAB22A, member RAS oncogene family
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RAB22A, RAB22A, member RAS oncogene family
  • Links
    NCBI Gene ID: 57403
    neXtProt AC: NX_Q9UL26
    UniProt: Q9UL26

  • Chr Location
    20q13.32; chr20:58309715-58367507 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    26
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    117
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 19334 NCBI Gene Model | MGI Sequence Detail 42338 C57BL/6J ±  kb
transcript NM_024436 RefSeq | MGI Sequence Detail 1909 Not Specified  
polypeptide P35285 UniProt | EBI | MGI Sequence Detail 194 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 119
    cDNA 119

    Microarray probesets 9
Other
Accession IDs
less
MGD-MRK-32112, MGI:1914673, MGI:1925122, MGI:2139037, MGI:2139342, MGI:2139386
References
more
  • Summaries
    All 41
    Gene Ontology 7
    Phenotypes 8
  • Earliest
    J:24144 Chavrier P, et al., The complexity of the Rab and Rho GTP-binding protein subfamilies revealed by a PCR cloning approach. Gene. 1992 Mar 15;112(2):261-4
  • Latest
    J:269335 Shakya S, et al., Rab22A recruits BLOC-1 and BLOC-2 to promote the biogenesis of recycling endosomes. EMBO Rep. 2018 Dec;19(12)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory