Pomc-ps1 Pseudogene Detail

Summary

• Symbol
  Pomc-ps1
• Name
  pro-opiomelanocortin, pseudogene 1
• Synonyms
  Pomc2, Pomc-2

• Feature Type
  pseudogene
• IDs
  MGI:104962
  NCBI Gene: 18977
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:15339699-15340234 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 10.39 cM
• Mapping Data
  24 experiments

Strain
Comparison

• SNPs within 2kb
  41 from dbSNP Build 142
• Strain Annotations
  1
• RFLP
  8

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_104962	pseudogene	Chr19:15339699-15340234 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Expression

• cDNA Data
  1

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  18977

Representative Sequences			Length	Strain/Species
genomic	18977	NCBI Gene Model | MGI Sequence Detail	536	C57BL/6J

Molecular
Reagents

• All nucleic 10

  Genomic 4

  cDNA 5

  Other 1

Other
Accession IDs

MGD-MRK-13581, MGD-MRK-13583, MGD-MRK-31035

References

• Summaries
  All 28
• Earliest
  J:7138 Uhler M, et al., The mouse genome contains two nonallelic pro-opiomelanocortin genes. J Biol Chem. 1983 Aug 10;258(15):9444-53
• Latest
  J:70962 Janowsky A, et al., Mapping genes that regulate density of dopamine transporters and correlated behaviors in recombinant inbred mice. J Pharmacol Exp Ther. 2001 Aug;298(2):634-43