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Hmgb1-rs16 Pseudogene Detail
Summary
  • Symbol
    Hmgb1-rs16
  • Name
    high mobility group box 1, related sequence 16
  • Synonyms
    Hmg1-rs16
Location &
Maps
more
  • Sequence Map
    Chr9:104046617-104047073 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 56.61 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    115 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_104765
 pseudogene Chr9:104046398-104047073 (-)
129S1/SvImJ ENSMUSG00200017295
 pseudogene Chr9:101207908-101208520 (-)
A/J ENSMUSG00195020250
 pseudogene Chr9:100432535-100433147 (-)
AKR/J ENSMUSG00220040403
 pseudogene Chr9:100822147-100822759 (-)
BALB/cJ ENSMUSG00180024338
 pseudogene Chr9:100749049-100749661 (-)
C3H/HeJ ENSMUSG00175013066
 pseudogene Chr9:101091690-101092302 (-)
C57BL/6NJ ENSMUSG00215028309
 pseudogene Chr9:101083837-101084449 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012475
 pseudogene Chr9:99589242-99589867 (-)
CAST/EiJ ENSTCUG00005013437
 pseudogene Chr9:100892051-100892659 (-)
CBA/J ENSMUSG00210015525
 pseudogene Chr9:100932852-100933475 (-)
DBA/2J ENSMUSG00185012767
 pseudogene Chr9:101093969-101094581 (-)
FVB/NJ ENSMUSG00205031447
 pseudogene Chr9:101093256-101093868 (-)
JF1/MsJ ENSUMUG00000044783
 pseudogene Chr9:100942142-100942770 (-)
LP/J ENSMUSG00230020819
 pseudogene Chr9:101243292-101243904 (-)
NOD/ShiLtJ ENSMUSG00190042296
 pseudogene Chr9:100734741-100735353 (-)
NZO/HlLtJ ENSMUSG00225020965
 pseudogene Chr9:101463419-101464031 (-)
PWK/PhJ ENSLUMG00010028259
 pseudogene Chr9:100885009-100885637 (-)
SPRET/EiJ ENSMSPG00010049106
 pseudogene Chr9:102751263-102751898 (-)
WSB/EiJ ENSIUOG00005025765
 pseudogene Chr9:100168659-100169282 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 15296 NCBI Gene Model | MGI Sequence Detail 457 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    Genomic 1
Other
Accession IDs
less
MGD-MRK-28056
References
more
  • Summaries
    All 7
  • Earliest
    J:21498 Ferrari S, et al., The mouse gene coding for high mobility group 1 protein (HMG1). J Biol Chem. 1994 Nov 18;269(46):28803-8
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory