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Amy2-ps1 Pseudogene Detail
Summary
  • Symbol
    Amy2-ps1
  • Name
    amylase 2, pseudogene 1
  • Synonyms
    EG668723
  • Feature Type
    pseudogene
  • IDs
    MGI:104546
    NCBI Gene: 668723
  • Member of
    Amy cluster
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:113089565-113114013 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 49.35 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    84 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_104546
 pseudogene Chr3:113089550-113114013 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040341
 pseudogene Chr3:114943336-114960955 (-)
A/J MGP_AJ_G0040314
 pseudogene Chr3:111233712-111251760 (-)
AKR/J MGP_AKRJ_G0040251
 pseudogene Chr3:113975630-113998817 (-)
BALB/cJ MGP_BALBcJ_G0040314
 pseudogene Chr3:111038391-111065659 (-)
C3H/HeJ MGP_C3HHeJ_G0039943
 pseudogene Chr3:114384278-114407983 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040915
 pseudogene Chr3:119143651-119165070 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0037327
 pseudogene Chr3:107086536-107093309 (-)
CAST/EiJ MGP_CASTEiJ_G0039023
 pseudogene Chr3:113812238-113845058 (-)
CBA/J MGP_CBAJ_G0039907
 pseudogene Chr3:123286381-123308712 (-)
DBA/2J MGP_DBA2J_G0040115
 pseudogene Chr3:110460750-110479863 (-)
FVB/NJ MGP_FVBNJ_G0040070
 pseudogene Chr3:108194973-108215786 (-)
LP/J MGP_LPJ_G0040162
 pseudogene Chr3:116474931-116501223 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0041012
 pseudogene Chr3:113588283-113612405 (-)
PWK/PhJ MGP_PWKPhJ_G0038714
 pseudogene Chr3:110194913-110225306 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038418
 pseudogene Chr3:111884289-111904100 (-)
WSB/EiJ MGP_WSBEiJ_G0039262
 pseudogene Chr3:114197607-114231357 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Amy2-ps1
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000081506 Ensembl Gene Model | MGI Sequence Detail 24449 C57BL/6J ±  kb
transcript ENSMUST00000122117 Ensembl | MGI Sequence Detail 1117 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 3
    Genomic 3
Other
Accession IDs
less
MGD-MRK-25978, MGI:3645475
References
more
  • Summaries
    All 12
    Diseases 1
    Phenotypes 4
  • Earliest
    J:7963 Wiebauer K, et al., A 78-kilobase region of mouse chromosome 3 contains salivary and pancreatic amylase genes and a pseudogene. Proc Natl Acad Sci U S A. 1985 Aug;82(16):5446-9
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory