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Pafah1b1-ps2 Pseudogene Detail
Summary
  • Symbol
    Pafah1b1-ps2
  • Name
    platelet-activating factor acetylhydrolase, isoform 1b, beta1 subunit, pseudogene 2
  • Synonyms
    Lis4, Mdsh4, Pafaha-ps2
Location &
Maps
more
  • Sequence Map
    Chr7:7064858-7066451 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 4.10 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    229 from dbSNP Build 142
  • Strain Annotations
    18
  • PCR
    1
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_103109
 pseudogene Chr7:7064443-7066451 (-)
129S1/SvImJ ENSMUSG00200042806
 pseudogene Chr7:3934232-3936240 (-)
A/J ENSMUSG00195052869
 pseudogene Chr7:3785454-3787462 (-)
AKR/J ENSMUSG00220031211
 pseudogene Chr7:1441659-1443667 (-)
BALB/cJ ENSMUSG00180050511
 pseudogene Chr7:3740695-3742703 (-)
C3H/HeJ ENSMUSG00175048329
 pseudogene Chr7:3676557-3678565 (-)
C57BL/6NJ ENSMUSG00215044105
 pseudogene Chr7:3822385-3824393 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005030092
 pseudogene Chr7:3882016-3883238 (-)
CBA/J ENSMUSG00210047972
 pseudogene Chr7:3696790-3698798 (-)
DBA/2J ENSMUSG00185043957
 pseudogene Chr7:3936956-3938964 (-)
FVB/NJ ENSMUSG00205049274
 pseudogene Chr7:3563735-3564954 (-)
JF1/MsJ ENSUMUG00000055467
 pseudogene Chr7:4008380-4009607 (-)
LP/J ENSMUSG00230041358
 pseudogene Chr7:6939745-6941753 (-)
NOD/ShiLtJ ENSMUSG00190050196
 pseudogene Chr7:3819012-3821020 (-)
NZO/HlLtJ ENSMUSG00225022247
 pseudogene Chr7:4783364-4785372 (-)
PWK/PhJ ENSLUMG00010049867
 pseudogene Chr7:7490474-7491702 (-)
SPRET/EiJ ENSMSPG00010050140
 pseudogene Chr7:3564101-3565321 (-)
WSB/EiJ ENSIUOG00005052360
 pseudogene Chr7:3705792-3707011 (-)



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 100418400 NCBI Gene Model | MGI Sequence Detail 1594 C57BL/6J ±  kb
For the selected sequence
Molecular
Reagents
less
  • All nucleic 6
    Genomic 3
    cDNA 1
    Primer pair 1
    Other 1
Other
Accession IDs
less
MGD-MRK-23973
References
more
  • Summaries
    All 8
    Developmental Gene Expression 1
  • Earliest
    J:22395 Peterfy M, et al., Lissencephaly-1 is one of the most conserved proteins between mouse and human: a single amino-acid difference in 410 residues. Gene. 1994 Dec 15;150(2):415-6
  • Latest
    J:49765 Peterfy M, et al., Characterization and chromosomal mapping of two pseudogenes of the mouse Pafaha/Lis1 gene: retrointegration hotspots in the mouse genome. Gene. 1998 Aug 31;216(2):225-31
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/01/2026
MGI 6.24 		The Jackson Laboratory