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Krtap1-3 Gene Detail
Summary
  • Symbol
    Krtap1-3
  • Name
    keratin associated protein 1-3
  • Synonyms
    OTTMUSG00000004964
  • Feature Type
    protein coding gene
  • IDs
    MGI:3650443
    NCBI Gene: 435273
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:99481287-99482165 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 62.94 cM
Strain
Comparison
more
  • SNPs within 2kb
    142 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650443
 protein coding gene Chr11:99481287-99482203 (-)
129S1/SvImJ ENSMUSG00200050886
 protein coding gene Chr11:96743120-96743998 (-)
A/J ENSMUSG00195047694
 protein coding gene Chr11:96451847-96452725 (-)
AKR/J ENSMUSG00220049285
 protein coding gene Chr11:96708644-96709522 (-)
BALB/cJ ENSMUSG00180044537
 protein coding gene Chr11:96739184-96740062 (-)
C3H/HeJ ENSMUSG00175050354
 protein coding gene Chr11:96716673-96717551 (-)
C57BL/6NJ ENSMUSG00215054032
 protein coding gene Chr11:96300024-96300902 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017128
 protein coding gene Chr11:95519990-95520932 (-)
CAST/EiJ ENSTCUG00005049767
 protein coding gene Chr11:96238069-96238947 (-)
CBA/J ENSMUSG00210051576
 protein coding gene Chr11:96424901-96425779 (-)
DBA/2J ENSMUSG00185051073
 protein coding gene Chr11:96766562-96767440 (-)
FVB/NJ ENSMUSG00205027439
 protein coding gene Chr11:96632413-96633291 (-)
JF1/MsJ ENSUMUG00000051532
 protein coding gene Chr11:97059049-97059956 (-)
LP/J ENSMUSG00230050692
 protein coding gene Chr11:97819379-97820257 (-)
NOD/ShiLtJ ENSMUSG00190038365
 protein coding gene Chr11:96801464-96802342 (-)
NZO/HlLtJ ENSMUSG00225049978
 protein coding gene Chr11:99879829-99880707 (-)
PWK/PhJ ENSLUMG00010047545
 protein coding gene Chr11:96617455-96618348 (-)
SPRET/EiJ ENSMSPG00010045674
 protein coding gene Chr11:97148027-97148919 (-)
WSB/EiJ ENSIUOG00005046293
 protein coding gene Chr11:96576787-96577665 (-)



Homology
more
  • Human Ortholog
    KRTAP1-1, keratin associated protein 1-1
  • Vertebrate Orthologs
    5
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRTAP1-1, keratin associated protein 1-1
  • Synonyms
    HB2A, hKAP1.7, KAP1.1, KAP1.1A, KAP1.1B, KAP1.6, KAP1.7, KRTAP1.1, KRTAP1A
  • Links
    NCBI Gene ID: 81851
    UniProt: Q07627

  • Chr Location
    17q21.2; chr17:41040541-41041450 (-)  GRCh38
  • Human Ortholog
    KRTAP1-3, keratin associated protein 1-3
  • Synonyms
    KAP1.2, KAP1.3, KAP1.6, KAP1.8A, KAP1.8B, KAP1.9, KRTAP1.3
  • Links
    NCBI Gene ID: 81850
    UniProt: Q8IUG1

  • Chr Location
    17q21.2; chr17:41033884-41034874 (-)  GRCh38
  • Human Ortholog
    KRTAP1-4, keratin associated protein 1-4
  • Synonyms
    KAP1.4, KRTAP1.4
  • Links
    NCBI Gene ID: 728255
    UniProt: P0C5Y4

  • Chr Location
    17q21.2; chr17:41029351-41030195 (-)  GRCh38
  • Human Ortholog
    KRTAP1-5, keratin associated protein 1-5
  • Synonyms
    KAP1.5, KRTAP1.5
  • Links
    NCBI Gene ID: 83895
    UniProt: Q9BYS1

  • Chr Location
    17q21.2; chr17:41026026-41027208 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000078131 Ensembl Gene Model | MGI Sequence Detail 879 C57BL/6J ±  kb
    transcript ENSMUST00000104930 Ensembl | MGI Sequence Detail 879 Not Applicable  
    polypeptide ENSMUSP00000100535 Ensembl | MGI Sequence Detail 173 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      1 Sequence
    • InterPro Domains
      IPR002494 Keratin-associated protein
    Molecular
    Reagents
    less

    • Microarray probesets 1
    References
    more
    • Summaries
      All 24
      Gene Ontology 2
      Phenotypes 11
    • Earliest
      J:56548 Zheng B, et al., Engineering a mouse balancer chromosome. Nat Genet. 1999 Aug;22(4):375-8
    • Latest
      J:357457 Kumar V, et al., Keratin-dependent thymic stromal lymphopoietin expression suggests a link between skin blistering and atopic disease. J Allergy Clin Immunol. 2016;138(5):1461-1464
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory