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Krabd5 Gene Detail
Summary
  • Symbol
    Krabd5
  • Name
    KRAB domain containing 5
  • Synonyms
    EG328280, Gm10037, Krbox5
Location &
Maps
more
  • Sequence Map
    Chr13:67979225-67992154 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 34.82 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    588 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645096
 protein coding gene Chr13:67979120-67992998 (+)
129S1/SvImJ ENSMUSG00200012483
 protein coding gene Chr13:62760524-62771885 (+)
A/J ENSMUSG00195027563
 protein coding gene Chr13:63031700-63043077 (+)
AKR/J ENSMUSG00220035225
 protein coding gene Chr13:61996279-62007649 (+)
BALB/cJ ENSMUSG00180019726
 protein coding gene Chr13:63511056-63522424 (+)
C3H/HeJ ENSMUSG00175007424
 protein coding gene Chr13:63822631-63833989 (+)
C57BL/6NJ ENSMUSG00215008653
 protein coding gene Chr13:63505490-63518322 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J ENSMUSG00210009109
 protein coding gene Chr13:63145028-63156387 (+)
DBA/2J ENSMUSG00185007080
 protein coding gene Chr13:66840658-66852020 (+)
FVB/NJ ENSMUSG00205017272
 protein coding gene Chr13:62564858-62576229 (+)
JF1/MsJ no annotation
LP/J ENSMUSG00230033158
 protein coding gene Chr13:77015718-77024962 (+)
NOD/ShiLtJ ENSMUSG00190025764
 protein coding gene Chr13:63127380-63138755 (+)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
more
  • Human Ortholog
    KRABD5, KRAB domain containing 5
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRABD5, KRAB domain containing 5
  • Synonyms
    KRBOX5, ZNF720
  • Links
    NCBI Gene ID: 124411
    UniProt: Q7Z2F6

  • Chr Location
    16p11.2; chr16:31713229-31794869 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Gene trapped
    2
  • Genomic Mutations
    1 involving Krabd5
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    8 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000058246 Ensembl Gene Model | MGI Sequence Detail 12930 C57BL/6J ±  kb
transcript ENSMUST00000221266 Ensembl | MGI Sequence Detail 549 Not Applicable  
polypeptide ENSMUSP00000152830 Ensembl | MGI Sequence Detail 91 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    4 Sequences
  • InterPro Domains
    IPR001909 Krueppel-associated box
    IPR036051 Krueppel-associated box domain superfamily
    IPR050169 Krueppel C2H2-type zinc-finger
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 1
Other
Accession IDs
less
MGI:7513893, MGI:8328265
References
more
  • Summaries
    All 23
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory