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Cxcl3 Gene Detail
Summary
  • Symbol
    Cxcl3
  • Name
    C-X-C motif chemokine ligand 3
  • Synonyms
    Dcip1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3037818
    NCBI Gene: 330122
  • Alliance
    genome feature page
  • Transcription Start Sites
    15 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:90933960-90935952 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 44.78 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    25 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3037818
 protein coding gene Chr5:90933960-90937459 (+)
129S1/SvImJ ENSMUSG00200007709
 protein coding gene Chr5:86667977-86669974 (+)
A/J ENSMUSG00195024463
 protein coding gene Chr5:85836727-85838717 (+)
AKR/J ENSMUSG00220012015
 protein coding gene Chr5:85982369-85984359 (+)
BALB/cJ ENSMUSG00180022951
 protein coding gene Chr5:85696319-85698316 (+)
C3H/HeJ ENSMUSG00175037128
 protein coding gene Chr5:87791936-87793931 (+)
C57BL/6NJ ENSMUSG00215023184
 protein coding gene Chr5:86529697-86531687 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027395
 protein coding gene Chr5:83955520-83958995 (+)
CAST/EiJ ENSTCUG00005033514
 protein coding gene Chr5:85441258-85443249 (+)
CBA/J ENSMUSG00210005708
 protein coding gene Chr5:86591713-86593710 (+)
DBA/2J ENSMUSG00185038179
 protein coding gene Chr5:88512668-88514667 (+)
FVB/NJ ENSMUSG00205023500
 protein coding gene Chr5:85412509-85414502 (+)
JF1/MsJ ENSUMUG00000040632
 protein coding gene Chr5:92791477-92793451 (+)
LP/J ENSMUSG00230023737
 protein coding gene Chr5:93194323-93196322 (+)
NOD/ShiLtJ ENSMUSG00190030593
 protein coding gene Chr5:85474208-85476203 (+)
NZO/HlLtJ ENSMUSG00225008512
 protein coding gene Chr5:98341848-98343841 (+)
PWK/PhJ ENSLUMG00010025899
 protein coding gene Chr5:85461545-85463503 (+)
SPRET/EiJ ENSMSPG00010033827
 protein coding gene Chr5:87863501-87865513 (+)
WSB/EiJ ENSIUOG00005027308
 protein coding gene Chr5:88475985-88477972 (+)



Homology
more
  • Human Ortholog
    CXCL1, C-X-C motif chemokine ligand 1
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CXCL1, C-X-C motif chemokine ligand 1
  • Synonyms
    FSP, GRO1, GROa, MGSA, MGSA-a, NAP-3, SCYB1
  • Links
    NCBI Gene ID: 2919
    UniProt: P09341

  • Chr Location
    4q13.3; chr4:73869392-73871308 (+)  GRCh38
  • Human Ortholog
    CXCL2, C-X-C motif chemokine ligand 2
  • Synonyms
    CINC-2a, GRO2, GROb, MGSA-b, MIP2, MIP-2a, MIP2A, SCYB2
  • Links
    NCBI Gene ID: 2920
    UniProt: P19875

  • Chr Location
    4q13.3; chr4:74097040-74099196 (-)  GRCh38
  • Human Ortholog
    CXCL3, C-X-C motif chemokine ligand 3
  • Synonyms
    CINC-2b, GRO3, GROg, MIP-2b, MIP2B, SCYB3
  • Links
    NCBI Gene ID: 2921
    UniProt: P19876

  • Chr Location
    4q13.3; chr4:74036589-74038807 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    13 phenotype references
  • All Mutations and Alleles
    11
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    5
  • Radiation induced
    1
  • Spontaneous
    1
  • Targeted
    2
  • Genomic Mutations
    4 involving Cxcl3
  • Find Mice (IMSR)
    18 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    22
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    620
  • Tissues
    10
  • cDNA Data
    8
  • Literature Summary
    4
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 330122 NCBI Gene Model | MGI Sequence Detail 1993 C57BL/6J ±  kb
transcript NM_203320 RefSeq | MGI Sequence Detail 1018 C57BL/6  
polypeptide Q6W5C0 UniProt | EBI | MGI Sequence Detail 100 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    cDNA 8
    Primer pair 1

    Microarray probesets 2
References
more
  • Summaries
    All 48
    Developmental Gene Expression 4
    Gene Ontology 7
    Phenotypes 13
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:350803 Fang C, et al., TREM2 promotes macrophage polarization from M1 to M2 and suppresses osteoarthritis through the NF-kappaB/CXCL3 axis. Int J Biol Sci. 2024;20(6):1992-2007
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory