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Rundc3b Gene Detail
Summary
  • Symbol
    Rundc3b
  • Name
    RUN domain containing 3B
  • Synonyms
    LOC242819, MGC:68340
  • Feature Type
    protein coding gene
  • IDs
    MGI:2685286
    NCBI Gene: 242819
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:8540334-8672952 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 3.43 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3107 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2685286
 protein coding gene Chr5:8540334-8673079 (-)
129S1/SvImJ ENSMUSG00200001952
 protein coding gene Chr5:5234070-5366793 (-)
A/J ENSMUSG00195007410
 protein coding gene Chr5:5244335-5380581 (-)
AKR/J ENSMUSG00220001890
 protein coding gene Chr5:5156563-5288975 (-)
BALB/cJ ENSMUSG00180016113
 protein coding gene Chr5:5000011-5132757 (-)
C3H/HeJ ENSMUSG00175025419
 protein coding gene Chr5:5175230-5307971 (-)
C57BL/6NJ ENSMUSG00215016339
 protein coding gene Chr5:5456824-5589546 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026958
 protein coding gene Chr5:5093469-5214632 (-)
CAST/EiJ ENSTCUG00005001373
 protein coding gene Chr5:5359102-5487885 (-)
CBA/J ENSMUSG00210002558
 protein coding gene Chr5:5541438-5674189 (-)
DBA/2J ENSMUSG00185028088
 protein coding gene Chr5:5543636-5676371 (-)
FVB/NJ ENSMUSG00205007196
 protein coding gene Chr5:5252047-5382796 (-)
JF1/MsJ ENSUMUG00000002013
 protein coding gene Chr5:5590970-5720204 (-)
LP/J ENSMUSG00230002671
 protein coding gene Chr5:9491542-9624251 (-)
NOD/ShiLtJ ENSMUSG00190011792
 protein coding gene Chr5:5068743-5198279 (-)
NZO/HlLtJ ENSMUSG00225008477
 protein coding gene Chr5:13226922-13359641 (-)
PWK/PhJ ENSLUMG00010018634
 protein coding gene Chr5:5490342-5619674 (-)
SPRET/EiJ ENSMSPG00010004753
 protein coding gene Chr5:5406722-5528778 (-)
WSB/EiJ ENSIUOG00005022770
 protein coding gene Chr5:5257360-5390021 (-)



Homology
more
  • Human Ortholog
    RUNDC3B, RUN domain containing 3B
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RUNDC3B, RUN domain containing 3B
  • Synonyms
    RPIB9, RPIP9
  • Links
    NCBI Gene ID: 154661
    UniProt: Q96NL0

  • Chr Location
    7q21.12; chr7:87627548-87832296 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    597
  • cDNA Data
    15
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000040570 Ensembl Gene Model | MGI Sequence Detail 132619 C57BL/6J ±  kb
    transcript ENSMUST00000115378 Ensembl | MGI Sequence Detail 1891 Not Applicable  
    polypeptide ENSMUSP00000111036 Ensembl | MGI Sequence Detail 457 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 15
      cDNA 15

      Microarray probesets 3
    References
    more
    • Summaries
      All 25
      Phenotypes 6
    • Earliest
      J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/15/2026
    MGI 6.29     		The Jackson Laboratory