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Ankrd13c Gene Detail
Summary
  • Symbol
    Ankrd13c
  • Name
    ankyrin repeat domain 13c
  • Feature Type
    protein coding gene
  • IDs
    MGI:2139746
    NCBI Gene: 433667
  • Alliance
    genome feature page
  • Transcription Start Sites
    11 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:157652876-157713671 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 81.59 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    895 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2139746
 protein coding gene Chr3:157650886-157713671 (+)
129S1/SvImJ ENSMUSG00200000069
 protein coding gene Chr3:154653857-154714653 (+)
A/J ENSMUSG00195002591
 protein coding gene Chr3:154780355-154841130 (+)
AKR/J ENSMUSG00220010923
 protein coding gene Chr3:153204491-153265284 (+)
BALB/cJ ENSMUSG00180006415
 protein coding gene Chr3:154632073-154692845 (+)
C3H/HeJ ENSMUSG00175003269
 protein coding gene Chr3:154248539-154309315 (+)
C57BL/6NJ ENSMUSG00215004205
 protein coding gene Chr3:154859727-154920534 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025766
 protein coding gene Chr3:150806480-150866255 (+)
CAST/EiJ ENSTCUG00005000042
 protein coding gene Chr3:155294292-155355558 (+)
CBA/J ENSMUSG00210000352
 protein coding gene Chr3:154878778-154939551 (+)
DBA/2J ENSMUSG00185000046
 protein coding gene Chr3:155529445-155590226 (+)
FVB/NJ ENSMUSG00205000103
 protein coding gene Chr3:153791761-153852568 (+)
JF1/MsJ ENSUMUG00000000043
 protein coding gene Chr3:154269844-154331105 (+)
LP/J ENSMUSG00230008616
 protein coding gene Chr3:157398488-157459269 (+)
NOD/ShiLtJ ENSMUSG00190007395
 protein coding gene Chr3:155881828-155942602 (+)
NZO/HlLtJ ENSMUSG00225005264
 protein coding gene Chr3:159923832-159984603 (+)
PWK/PhJ ENSLUMG00010000041
 protein coding gene Chr3:154213727-154274521 (+)
SPRET/EiJ ENSMSPG00010000291
 protein coding gene Chr3:155578405-155638211 (+)
WSB/EiJ ENSIUOG00005003379
 protein coding gene Chr3:154999994-155061508 (+)



Homology
more
  • Human Ortholog
    ANKRD13C, ankyrin repeat domain 13C
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ANKRD13C, ankyrin repeat domain 13C
  • Synonyms
    dJ677H15.3
  • Links
    NCBI Gene ID: 81573
    UniProt: Q8N6S4

  • Chr Location
    1p31.1; chr1:70258999-70354734 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotypes from 1 allele in 1 genetic background
    12 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    20
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    663
  • Tissues
    9
  • cDNA Data
    12
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000039988 Ensembl Gene Model | MGI Sequence Detail 60796 C57BL/6J ±  kb
    transcript ENSMUST00000040787 Ensembl | MGI Sequence Detail 3903 Not Applicable  
    polypeptide ENSMUSP00000038662 Ensembl | MGI Sequence Detail 541 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    • UniProt
      2 Sequences
    • Protein Ontology
      PR:000032323 ankyrin repeat domain-containing protein 13C
      (term hierarchy)
    • InterPro Domains
      IPR002110 Ankyrin repeat
      IPR036770 Ankyrin repeat-containing domain superfamily
      IPR021832 Ankyrin repeat domain-containing protein 13
      IPR055285 Ankyrin repeat domain-containing protein 13, C-terminal
    Molecular
    Reagents
    less
    • All nucleic 12
      cDNA 12

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:2139891
    References
    more
    • Summaries
      All 35
      Developmental Gene Expression 1
      Gene Ontology 4
      Phenotypes 12
    • Earliest
      J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
    • Latest
      J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory