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Snrnp25 Gene Detail
Summary
  • Symbol
    Snrnp25
  • Name
    small nuclear ribonucleoprotein 25 (U11/U12)
  • Synonyms
    3300001G02Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1925622
    NCBI Gene: 78372
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
  • Regulated by
    Rr695568 (1 regulatory region)
Location &
Maps
more
  • Sequence Map
    Chr11:32155415-32158984 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 18.82 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    223 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1925622
 protein coding gene Chr11:32155415-32158996 (+)
129S1/SvImJ ENSMUSG00200009100
 protein coding gene Chr11:29191228-29194797 (+)
A/J ENSMUSG00195013209
 protein coding gene Chr11:29106990-29110576 (+)
AKR/J ENSMUSG00220007875
 protein coding gene Chr11:29300081-29303666 (+)
BALB/cJ ENSMUSG00180007810
 protein coding gene Chr11:29122745-29126315 (+)
C3H/HeJ ENSMUSG00175016189
 protein coding gene Chr11:29114387-29117956 (+)
C57BL/6NJ ENSMUSG00215007110
 protein coding gene Chr11:29062948-29066517 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016176
 protein coding gene Chr11:27785315-27789119 (+)
CAST/EiJ ENSTCUG00005028821
 protein coding gene Chr11:28998719-29002300 (+)
CBA/J ENSMUSG00210009737
 protein coding gene Chr11:28997621-29001190 (+)
DBA/2J ENSMUSG00185017912
 protein coding gene Chr11:29192899-29196485 (+)
FVB/NJ ENSMUSG00205017412
 protein coding gene Chr11:29182300-29185869 (+)
JF1/MsJ ENSUMUG00000007654
 protein coding gene Chr11:29435682-29439268 (+)
LP/J ENSMUSG00230003182
 protein coding gene Chr11:30340871-30344440 (+)
NOD/ShiLtJ ENSMUSG00190021855
 protein coding gene Chr11:29253895-29257464 (+)
NZO/HlLtJ ENSMUSG00225030620
 protein coding gene Chr11:32243992-32247559 (+)
PWK/PhJ ENSLUMG00010017311
 protein coding gene Chr11:29088370-29091977 (+)
SPRET/EiJ ENSMSPG00010018444
 protein coding gene Chr11:29465981-29469501 (+)
WSB/EiJ ENSIUOG00005012613
 protein coding gene Chr11:29186817-29190395 (+)



Homology
more
  • Human Ortholog
    SNRNP25, small nuclear ribonucleoprotein U11/U12 subunit 25
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNRNP25, small nuclear ribonucleoprotein U11/U12 subunit 25
  • Synonyms
    C16orf33
  • Links
    NCBI Gene ID: 79622
    UniProt: Q9BV90

  • Chr Location
    16p13.3; chr16:53828-57669 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    7
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    617
  • Tissues
    4
  • cDNA Data
    43
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040767 Ensembl Gene Model | MGI Sequence Detail 3570 C57BL/6J ±  kb
transcript ENSMUST00000249622 Ensembl | MGI Sequence Detail 821 Not Applicable  
polypeptide ENSMUSP00000159831 Ensembl | MGI Sequence Detail 160 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 44
    cDNA 43
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2144360
References
more
  • Summaries
    All 35
    Developmental Gene Expression 2
    Gene Ontology 7
    Phenotypes 6
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:367882 Li C, et al., Alternative splicing categorizes organ development by stage and reveals unique human splicing variants linked to neuromuscular disorders. J Biol Chem. 2025 Apr 25;301(6):108542
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory