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Lysmd4 Gene Detail
Summary
  • Symbol
    Lysmd4
  • Name
    LysM, putative peptidoglycan-binding, domain containing 4
  • Synonyms
    4930506D23Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1922349
    NCBI Gene: 75099
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:66872292-66878216 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 36.71 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    212 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1922349
 protein coding gene Chr7:66872292-66957078 (+)
129S1/SvImJ ENSMUSG00200010600
 protein coding gene Chr7:53581914-53587804 (+)
A/J ENSMUSG00195012301
 protein coding gene Chr7:58005100-58010991 (+)
AKR/J ENSMUSG00220020031
 protein coding gene Chr7:51507211-51513101 (+)
BALB/cJ ENSMUSG00180004397
 protein coding gene Chr7:54716349-54722239 (+)
C3H/HeJ ENSMUSG00175010735
 protein coding gene Chr7:55508919-55514808 (+)
C57BL/6NJ ENSMUSG00215012154
 protein coding gene Chr7:54648980-54654870 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029847
 protein coding gene Chr7:69942961-69948890 (+)
CAST/EiJ ENSTCUG00005011936
 protein coding gene Chr7:58190029-58195909 (+)
CBA/J ENSMUSG00210019744
 protein coding gene Chr7:55347380-55353270 (+)
DBA/2J ENSMUSG00185005812
 protein coding gene Chr7:59687986-59693878 (+)
FVB/NJ ENSMUSG00205003778
 protein coding gene Chr7:55351629-55357522 (+)
JF1/MsJ ENSUMUG00000007477
 protein coding gene Chr7:64428586-64434436 (+)
LP/J ENSMUSG00230019660
 protein coding gene Chr7:65771882-65777774 (+)
NOD/ShiLtJ ENSMUSG00190007016
 protein coding gene Chr7:55455663-55461552 (+)
NZO/HlLtJ ENSMUSG00225015758
 protein coding gene Chr7:64047121-64053010 (+)
PWK/PhJ ENSLUMG00010018036
 protein coding gene Chr7:53970055-53975906 (+)
SPRET/EiJ ENSMSPG00010002767
 protein coding gene Chr7:54342641-54348826 (+)
WSB/EiJ ENSIUOG00005004514
 protein coding gene Chr7:55915054-55920955 (+)



Homology
more
  • Human Ortholog
    LYSMD4, LysM domain containing 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LYSMD4, LysM domain containing 4
  • Links
    NCBI Gene ID: 145748
    UniProt: Q5XG99

  • Chr Location
    15q26.3; chr15:99715697-99733561 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    661
  • Tissues
    6
  • cDNA Data
    40
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75099 NCBI Gene Model | MGI Sequence Detail 5925 C57BL/6J ±  kb
transcript NM_001357964 RefSeq | MGI Sequence Detail 3409 C57BL/6  
polypeptide Q8CC84 UniProt | EBI | MGI Sequence Detail 293 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000030809 LysM and putative peptidoglycan-binding domain-containing protein 4
    (term hierarchy)
  • InterPro Domains
    IPR045030 LysM and putative peptidoglycan-binding domain-containing protein 1-4
    IPR018392 LysM domain
    IPR036779 LysM domain superfamily
  • GlyGen
    Q8CC84 1 site
Molecular
Reagents
less
  • All nucleic 40
    cDNA 40

    Microarray probesets 5
References
more
  • Summaries
    All 39
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 16
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory