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Crct1 Gene Detail
Summary
  • Symbol
    Crct1
  • Name
    cysteine-rich C-terminal 1
  • Synonyms
    2300002G24Rik, Nice-1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921425
    NCBI Gene: 74175
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:92921512-92922993 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 40.14 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    119 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921425
 protein coding gene Chr3:92921512-92922994 (-)
129S1/SvImJ ENSMUSG00200038433
 protein coding gene Chr3:89710902-89712384 (-)
A/J ENSMUSG00195052893
 protein coding gene Chr3:89718889-89720371 (-)
AKR/J ENSMUSG00220045196
 protein coding gene Chr3:88939719-88941201 (-)
BALB/cJ ENSMUSG00180048449
 protein coding gene Chr3:89887958-89889440 (-)
C3H/HeJ ENSMUSG00175042448
 protein coding gene Chr3:89661982-89663464 (-)
C57BL/6NJ ENSMUSG00215047874
 protein coding gene Chr3:90268023-90269505 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025293
 protein coding gene Chr3:87178823-87180335 (-)
CAST/EiJ ENSTCUG00005041633
 protein coding gene Chr3:90044773-90046255 (-)
CBA/J ENSMUSG00210044842
 protein coding gene Chr3:89771779-89773261 (-)
DBA/2J ENSMUSG00185049130
 protein coding gene Chr3:89991377-89992859 (-)
FVB/NJ ENSMUSG00205048545
 protein coding gene Chr3:88765694-88767176 (-)
JF1/MsJ ENSUMUG00000040921
 protein coding gene Chr3:89552451-89553933 (-)
LP/J ENSMUSG00230039719
 protein coding gene Chr3:92007870-92009352 (-)
NOD/ShiLtJ ENSMUSG00190048640
 protein coding gene Chr3:90126767-90128249 (-)
NZO/HlLtJ ENSMUSG00225008065
 protein coding gene Chr3:94852559-94854041 (-)
PWK/PhJ ENSLUMG00010039640
 protein coding gene Chr3:89601608-89603090 (-)
SPRET/EiJ ENSMSPG00010046090
 protein coding gene Chr3:90083677-90084823 (-)
WSB/EiJ ENSIUOG00005049703
 protein coding gene Chr3:90278648-90280130 (-)



Homology
more
  • Human Ortholog
    CRCT1, cysteine rich C-terminal 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CRCT1, cysteine rich C-terminal 1
  • Synonyms
    C1orf42, NICE-1, NICE1
  • Links
    NCBI Gene ID: 54544
    UniProt: Q9UGL9

  • Chr Location
    1q21.3; chr1:152514482-152516008 (+)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (other)
    1
  • Gene trapped
    1
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving Crct1
  • Find Mice (IMSR)
    10 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

Biological Process

Cellular Component

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    618
  • Tissues
    2
  • cDNA Data
    30
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 74175 NCBI Gene Model | MGI Sequence Detail 1482 C57BL/6J ±  kb
transcript NM_028798 RefSeq | MGI Sequence Detail 717 C57BL/6  
polypeptide NP_083074 RefSeq | MGI Sequence Detail 102 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR031698 Cysteine-rich C-terminal protein 1
  • GlyGen
    Q6PAI5 1 site
Molecular
Reagents
less
  • All nucleic 30
    cDNA 30

    Microarray probesets 4
Other
Accession IDs
less
MGI:2139602
References
more
  • Summaries
    All 32
    Developmental Gene Expression 1
    Diseases 1
    Gene Ontology 1
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory