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Abracl Gene Detail
Summary
  • Symbol
    Abracl
  • Name
    ABRA C-terminal like
  • Synonyms
    1700028I04Rik, 3110003A17Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920362
    NCBI Gene: 73112
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:17887008-17899000 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 7.39 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    457 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920362
 protein coding gene Chr10:17887008-17899036 (-)
129S1/SvImJ ENSMUSG00200008856
 protein coding gene Chr10:14892163-14904197 (-)
A/J ENSMUSG00195006479
 protein coding gene Chr10:14904110-14916144 (-)
AKR/J ENSMUSG00220009746
 protein coding gene Chr10:14814160-14826196 (-)
BALB/cJ ENSMUSG00180014548
 protein coding gene Chr10:15028455-15040490 (-)
C3H/HeJ ENSMUSG00175019679
 protein coding gene Chr10:15048314-15060348 (-)
C57BL/6NJ ENSMUSG00215003365
 protein coding gene Chr10:14837832-14849861 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015137
 protein coding gene Chr10:13992419-14002893 (-)
CAST/EiJ ENSTCUG00005028246
 protein coding gene Chr10:14799304-14810885 (-)
CBA/J ENSMUSG00210015163
 protein coding gene Chr10:14985936-14997970 (-)
DBA/2J ENSMUSG00185006629
 protein coding gene Chr10:14970488-14982521 (-)
FVB/NJ ENSMUSG00205015609
 protein coding gene Chr10:14873887-14885939 (-)
JF1/MsJ ENSUMUG00000008803
 protein coding gene Chr10:15031913-15043519 (-)
LP/J ENSMUSG00230016865
 protein coding gene Chr10:16626968-16639001 (-)
NOD/ShiLtJ ENSMUSG00190010325
 protein coding gene Chr10:14956128-14968161 (-)
NZO/HlLtJ ENSMUSG00225029451
 protein coding gene Chr10:21096755-21108783 (-)
PWK/PhJ ENSLUMG00010015209
 protein coding gene Chr10:14744899-14756517 (-)
SPRET/EiJ ENSMSPG00010010625
 protein coding gene Chr10:15389785-15401423 (-)
WSB/EiJ ENSIUOG00005022617
 protein coding gene Chr10:14555203-14567236 (-)



Homology
more
  • Human Ortholog
    ABRACL, ABRA C-terminal like
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ABRACL, ABRA C-terminal like
  • Synonyms
    C6orf115, Costars, HSPC280, PRO2013
  • Links
    NCBI Gene ID: 58527
    UniProt: Q9P1F3

  • Chr Location
    6q24.1; chr6:139027494-139043742 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
  • All Mutations and Alleles
    9
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    2
  • Gene trapped
    4
  • Targeted
    2
  • Genomic Mutations
    1 involving Abracl
  • Incidental Mutations
    APF
  • Find Mice (IMSR)
    14 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    698
  • Tissues
    98
  • cDNA Data
    53
  • Literature Summary
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73112 NCBI Gene Model | MGI Sequence Detail 11993 C57BL/6J ±  kb
transcript NM_028440 RefSeq | MGI Sequence Detail 826 C57BL/6  
polypeptide Q4KML4 UniProt | EBI | MGI Sequence Detail 81 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 56
    cDNA 53
    Primer pair 2
    Other 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:1919503
References
more
  • Summaries
    All 43
    Developmental Gene Expression 6
    Gene Ontology 2
    Phenotypes 13
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:341392 Troumpoukis D, et al., Characterization of the Abracl-Expressing Cell Populations in the Embryonic Mammalian Telencephalon. Biomolecules. 2023 Aug 31;13(9)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory