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Smim48 Gene Detail
Summary
  • Symbol
    Smim48
  • Name
    small integral membrane protein 48
  • Synonyms
    6330403K07Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918001
    NCBI Gene: 103712
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:70922767-70924339 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 43.21 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    58 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918001
 protein coding gene Chr11:70922767-70924443 (-)
129S1/SvImJ ENSMUSG00200042393
 protein coding gene Chr11:67870146-67871718 (-)
A/J ENSMUSG00195051862
 protein coding gene Chr11:67896521-67898093 (-)
AKR/J ENSMUSG00220054090
 protein coding gene Chr11:68013940-68015512 (-)
BALB/cJ ENSMUSG00180052631
 protein coding gene Chr11:67968068-67969640 (-)
C3H/HeJ ENSMUSG00175042985
 protein coding gene Chr11:67915385-67916957 (-)
C57BL/6NJ ENSMUSG00215052609
 protein coding gene Chr11:67692324-67693896 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0004761
 lincRNA gene Chr11:65793490-65795055 (-)
CAST/EiJ ENSTCUG00005048115
 protein coding gene Chr11:67460067-67461640 (-)
CBA/J ENSMUSG00210051685
 protein coding gene Chr11:67769466-67771038 (-)
DBA/2J ENSMUSG00185053794
 protein coding gene Chr11:68007826-68009399 (-)
FVB/NJ ENSMUSG00205033186
 protein coding gene Chr11:67862732-67864304 (-)
JF1/MsJ ENSUMUG00000056685
 protein coding gene Chr11:68406407-68407980 (-)
LP/J ENSMUSG00230053332
 protein coding gene Chr11:69080661-69082233 (-)
NOD/ShiLtJ ENSMUSG00190030292
 protein coding gene Chr11:68003018-68004590 (-)
NZO/HlLtJ ENSMUSG00225036306
 protein coding gene Chr11:71261868-71263440 (-)
PWK/PhJ ENSLUMG00010053369
 protein coding gene Chr11:67879402-67880975 (-)
SPRET/EiJ ENSMSPG00010048262
 protein coding gene Chr11:68606641-68607673 (-)
WSB/EiJ ENSIUOG00005045056
 protein coding gene Chr11:67894890-67896462 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    10 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    2
  • GO References
    2
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    627
  • Tissues
    17
  • cDNA Data
    66
  • Literature Summary
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000018451 Ensembl Gene Model | MGI Sequence Detail 1573 C57BL/6J ±  kb
transcript ENSMUST00000156068 Ensembl | MGI Sequence Detail 1494 Not Applicable  
polypeptide ENSMUSP00000158145 Ensembl | MGI Sequence Detail 121 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
Molecular
Reagents
less
  • All nucleic 68
    cDNA 67
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:2144152, MGI:3702440, MGI:8328262
References
more
  • Summaries
    All 39
    Developmental Gene Expression 7
    Gene Ontology 2
    Phenotypes 10
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:325730 Ahuja N, et al., Endothelial Cyp26b1 restrains murine heart valve growth during development. Dev Biol. 2022 Jun;486:81-95
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory