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Lysmd2 Gene Detail
Summary
  • Symbol
    Lysmd2
  • Name
    LysM, putative peptidoglycan-binding, domain containing 2
  • Synonyms
    2210402C18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1917332
    NCBI Gene: 70082
  • Alliance
    genome feature page
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr9:75533023-75545053 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 42.32 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    445 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1917332
 protein coding gene Chr9:75532403-75545055 (+)
129S1/SvImJ ENSMUSG00200018742
 protein coding gene Chr9:72637975-72650024 (+)
A/J ENSMUSG00195009477
 protein coding gene Chr9:72390655-72402712 (+)
AKR/J ENSMUSG00220014991
 protein coding gene Chr9:72517024-72529084 (+)
BALB/cJ ENSMUSG00180018138
 protein coding gene Chr9:72503241-72515299 (+)
C3H/HeJ ENSMUSG00175011377
 protein coding gene Chr9:72539138-72551195 (+)
C57BL/6NJ ENSMUSG00215008689
 protein coding gene Chr9:72487160-72499191 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0032445
 protein coding gene Chr9:72651014-72664424 (+)
CAST/EiJ ENSTCUG00005008869
 protein coding gene Chr9:72255940-72268981 (+)
CBA/J ENSMUSG00210013079
 protein coding gene Chr9:72593663-72605720 (+)
DBA/2J ENSMUSG00185006806
 protein coding gene Chr9:72624109-72636166 (+)
FVB/NJ ENSMUSG00205016931
 protein coding gene Chr9:72911424-72923483 (+)
JF1/MsJ ENSUMUG00000037376
 protein coding gene Chr9:72639326-72653231 (+)
LP/J ENSMUSG00230024194
 protein coding gene Chr9:72814827-72826876 (+)
NOD/ShiLtJ ENSMUSG00190028564
 protein coding gene Chr9:72718814-72730871 (+)
NZO/HlLtJ ENSMUSG00225024618
 protein coding gene Chr9:72921601-72933658 (+)
PWK/PhJ ENSLUMG00010015610
 protein coding gene Chr9:72570082-72583951 (+)
SPRET/EiJ ENSMSPG00010003665
 protein coding gene Chr9:73703415-73716164 (+)
WSB/EiJ ENSIUOG00005023321
 protein coding gene Chr9:72083350-72095404 (+)



Homology
more
  • Human Ortholog
    LYSMD2, LysM domain containing 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LYSMD2, LysM domain containing 2
  • Links
    NCBI Gene ID: 256586
    UniProt: Q8IV50

  • Chr Location
    15q21.2; chr15:51723011-51751585 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    8
  • Chemically induced (other)
    1
  • Endonuclease-mediated
    3
  • Gene trapped
    1
  • Targeted
    3
  • Genomic Mutations
    1 involving Lysmd2
  • Incidental Mutations
    CvDC
  • Find Mice (IMSR)
    12 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    605
  • Tissues
    2
  • cDNA Data
    21
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000032184 Ensembl Gene Model | MGI Sequence Detail 12031 C57BL/6J ±  kb
transcript ENSMUST00000034702 Ensembl | MGI Sequence Detail 1189 Not Applicable  
polypeptide ENSMUSP00000034702 Ensembl | MGI Sequence Detail 215 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000029616 LysM and putative peptidoglycan-binding domain-containing protein 2
    (term hierarchy)
  • InterPro Domains
    IPR045030 LysM and putative peptidoglycan-binding domain-containing protein 1-4
    IPR018392 LysM domain
    IPR036779 LysM domain superfamily
Molecular
Reagents
less
  • All nucleic 21
    cDNA 21

    Microarray probesets 3
Other
Accession IDs
less
MGI:2143256, MGI:2143312
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:294106 Soulez M, et al., Reevaluation of the Role of Extracellular Signal-Regulated Kinase 3 in Perinatal Survival and Postnatal Growth Using New Genetically Engineered Mouse Models. Mol Cell Biol. 2019 Mar 15;39(6)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory