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Rpf2 Gene Detail
Summary
  • Symbol
    Rpf2
  • Name
    ribosome production factor 2 homolog
  • Synonyms
    2810470K21Rik, Bxdc1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914489
    NCBI Gene: 67239
  • Alliance
    genome feature page
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:40099242-40123032 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 10, 21.76 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    697 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914489
 protein coding gene Chr10:40099242-40123035 (-)
129S1/SvImJ ENSMUSG00200008995
 protein coding gene Chr10:36954304-36978093 (-)
A/J ENSMUSG00195016328
 protein coding gene Chr10:37257146-37280937 (-)
AKR/J ENSMUSG00220026976
 protein coding gene Chr10:36933741-36957533 (-)
BALB/cJ ENSMUSG00180016269
 protein coding gene Chr10:37342356-37366150 (-)
C3H/HeJ ENSMUSG00175011021
 protein coding gene Chr10:37136645-37160435 (-)
C57BL/6NJ ENSMUSG00215007143
 protein coding gene Chr10:36887226-36911018 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015254
 protein coding gene Chr10:35701012-35722685 (-)
CAST/EiJ ENSTCUG00005027235
 protein coding gene Chr10:37346049-37366513 (-)
CBA/J ENSMUSG00210025681
 protein coding gene Chr10:37030090-37053883 (-)
DBA/2J ENSMUSG00185007190
 protein coding gene Chr10:37182728-37206520 (-)
FVB/NJ ENSMUSG00205010978
 protein coding gene Chr10:37097327-37121118 (-)
JF1/MsJ ENSUMUG00000029957
 protein coding gene Chr10:36971496-36991685 (-)
LP/J ENSMUSG00230014213
 protein coding gene Chr10:38944385-38968177 (-)
NOD/ShiLtJ ENSMUSG00190030033
 protein coding gene Chr10:37311011-37334801 (-)
NZO/HlLtJ ENSMUSG00225016450
 protein coding gene Chr10:43270249-43294041 (-)
PWK/PhJ ENSLUMG00010007650
 protein coding gene Chr10:37086261-37106614 (-)
SPRET/EiJ ENSMSPG00010019530
 protein coding gene Chr10:38109543-38133280 (-)
WSB/EiJ ENSIUOG00005014139
 protein coding gene Chr10:36859611-36883398 (-)



Homology
more
  • Human Ortholog
    RPF2, ribosome production factor 2 homolog
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RPF2, ribosome production factor 2 homolog
  • Synonyms
    bA397G5.4, BXDC1
  • Links
    NCBI Gene ID: 84154
    UniProt: Q9H7B2

  • Chr Location
    6q21; chr6:110982015-111028263 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    13 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    27
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    600
  • Tissues
    3
  • cDNA Data
    52
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000038510 Ensembl Gene Model | MGI Sequence Detail 23791 C57BL/6J ±  kb
transcript ENSMUST00000183309 Ensembl | MGI Sequence Detail 1296 Not Applicable  
polypeptide ENSMUSP00000138581 Ensembl | MGI Sequence Detail 306 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 52
    cDNA 52

    Microarray probesets 5
Other
Accession IDs
less
MGI:2143752, MGI:2143763
References
more
  • Summaries
    All 43
    Developmental Gene Expression 1
    Gene Ontology 7
    Phenotypes 13
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory