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Cdr2 Gene Detail
Summary
  • Symbol
    Cdr2
  • Name
    cerebellar degeneration-related 2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1100885
    NCBI Gene: 12585
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:120556259-120581535 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 65.04 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    708 from dbSNP Build 142
  • Strain Annotations
    19
  • RFLP
    1
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1100885
 protein coding gene Chr7:120556259-120581535 (-)
129S1/SvImJ ENSMUSG00200021978
 protein coding gene Chr7:107076954-107102230 (-)
A/J ENSMUSG00195034236
 protein coding gene Chr7:111600259-111627495 (-)
AKR/J ENSMUSG00220018991
 protein coding gene Chr7:105037735-105063012 (-)
BALB/cJ ENSMUSG00180031534
 protein coding gene Chr7:108268615-108293899 (-)
C3H/HeJ ENSMUSG00175025060
 protein coding gene Chr7:108981996-109007273 (-)
C57BL/6NJ ENSMUSG00215015400
 protein coding gene Chr7:108232044-108257323 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0030402
 protein coding gene Chr7:123087161-123112639 (-)
CAST/EiJ ENSTCUG00005037771
 protein coding gene Chr7:111537353-111562736 (-)
CBA/J ENSMUSG00210024135
 protein coding gene Chr7:108709772-108735048 (-)
DBA/2J ENSMUSG00185048031
 protein coding gene Chr7:113055770-113081047 (-)
FVB/NJ ENSMUSG00205022805
 protein coding gene Chr7:108716008-108741285 (-)
JF1/MsJ ENSUMUG00000023676
 protein coding gene Chr7:118139025-118164558 (-)
LP/J ENSMUSG00230034693
 protein coding gene Chr7:119164853-119190129 (-)
NOD/ShiLtJ ENSMUSG00190018984
 protein coding gene Chr7:108908304-108933582 (-)
NZO/HlLtJ ENSMUSG00225037817
 protein coding gene Chr7:117413745-117439021 (-)
PWK/PhJ ENSLUMG00010012013
 protein coding gene Chr7:107249322-107274597 (-)
SPRET/EiJ ENSMSPG00010008132
 protein coding gene Chr7:108461942-108486809 (-)
WSB/EiJ ENSIUOG00005012032
 protein coding gene Chr7:109594421-109619702 (-)



Homology
more
  • Human Ortholog
    CDR2, cerebellar degeneration related protein 2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CDR2, cerebellar degeneration related protein 2
  • Synonyms
    CDR62, Yo
  • Links
    NCBI Gene ID: 1039
    UniProt: Q01850

  • Chr Location
    16p12.2; chr16:22345936-22437165 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    9 phenotype references
Mice homozygous for a reporter allele are viable, fertile, and overtly normal.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    2
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    657
  • Tissues
    36
  • cDNA Data
    87
  • Literature Summary
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 12585 NCBI Gene Model | MGI Sequence Detail 25277 C57BL/6J ±  kb
transcript NM_001354986 RefSeq | MGI Sequence Detail 2546 ZRU/MplStud  
polypeptide P97817 UniProt | EBI | MGI Sequence Detail 455 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000005284 cerebellar degeneration-related protein 2
    (term hierarchy)
  • InterPro Domains
    IPR026079 Cerebellar degeneration-related protein 2
    IPR060423 Cerebellar degeneration-related protein 2-like, C-terminal domain
  • GlyGen
    P97817 1 site
Molecular
Reagents
less
  • All nucleic 89
    cDNA 88
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:2141845
References
more
  • Summaries
    All 34
    Developmental Gene Expression 4
    Gene Ontology 2
    Phenotypes 9
  • Earliest
    J:40255 Fletcher CF, et al., Mouse chromosomal locations of nine genes encoding homologs of human paraneoplastic neurologic disorder antigens. Genomics. 1997 Oct 15;45(2):313-9
  • Latest
    J:326541 Cyagen Biosciences Inc., Cyagen Biosciences Website. 2022;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory