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Imp4 Gene Detail
Summary
  • Symbol
    Imp4
  • Name
    IMP4, U3 small nucleolar ribonucleoprotein
  • Feature Type
    protein coding gene
  • IDs
    MGI:106572
    NCBI Gene: 27993
  • Alliance
    genome feature page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:34478951-34488437 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 13.22 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    495 from dbSNP Build 142
  • Strain Annotations
    19
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_106572
 protein coding gene Chr1:34478932-34488437 (+)
129S1/SvImJ ENSMUSG00200003442
 protein coding gene Chr1:32016326-32025596 (+)
A/J ENSMUSG00195041764
 protein coding gene Chr1:31692341-31701847 (+)
AKR/J ENSMUSG00220008901
 protein coding gene Chr1:31718468-31727973 (+)
BALB/cJ ENSMUSG00180010945
 protein coding gene Chr1:31804474-31813981 (+)
C3H/HeJ ENSMUSG00175001280
 protein coding gene Chr1:31696638-31706144 (+)
C57BL/6NJ ENSMUSG00215020352
 protein coding gene Chr1:31781478-31790985 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014021
 protein coding gene Chr1:29203181-29212674 (+)
CAST/EiJ ENSTCUG00005002715
 protein coding gene Chr1:31843016-31854187 (+)
CBA/J ENSMUSG00210005013
 protein coding gene Chr1:31542389-31551894 (+)
DBA/2J ENSMUSG00185010661
 protein coding gene Chr1:32606601-32616108 (+)
FVB/NJ ENSMUSG00205023617
 protein coding gene Chr1:31722104-31731610 (+)
JF1/MsJ ENSUMUG00000022276
 protein coding gene Chr1:31812729-31822074 (+)
LP/J ENSMUSG00230023409
 protein coding gene Chr1:32658475-32667747 (+)
NOD/ShiLtJ ENSMUSG00190030369
 protein coding gene Chr1:31702022-31711531 (+)
NZO/HlLtJ ENSMUSG00225013955
 protein coding gene Chr1:35926913-35936419 (+)
PWK/PhJ ENSLUMG00010029777
 protein coding gene Chr1:31386140-31395564 (+)
SPRET/EiJ ENSMSPG00010027918
 protein coding gene Chr1:32792883-32798066 (+)
WSB/EiJ ENSIUOG00005032593
 protein coding gene Chr1:31706107-31715365 (+)



Homology
more
  • Human Ortholog
    IMP4, IMP U3 small nucleolar ribonucleoprotein 4
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    IMP4, IMP U3 small nucleolar ribonucleoprotein 4
  • Synonyms
    BXDC4
  • Links
    NCBI Gene ID: 92856
    UniProt: Q96G21

  • Chr Location
    2q21.1; chr2:130342403-130347967 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    31
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    625
  • Tissues
    6
  • cDNA Data
    118
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 27993 NCBI Gene Model | MGI Sequence Detail 9487 C57BL/6J ±  kb
transcript NM_001420705 RefSeq | MGI Sequence Detail 5928 C57BL/6  
polypeptide Q8VHZ7 UniProt | EBI | MGI Sequence Detail 291 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 119
    cDNA 118
    Primer pair 1

    Microarray probesets 5
Other
Accession IDs
less
MGD-MRK-34266, MGI:2138091, MGI:2138515
References
more
  • Summaries
    All 39
    Developmental Gene Expression 2
    Gene Ontology 9
    Phenotypes 7
  • Earliest
    J:50869 Ko MSH, et al., Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. Hum Mol Genet. 1998 Nov;7(12):1967-78
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/15/2026
MGI 6.29 		The Jackson Laboratory