Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  5
• Reference
  J:19414 Nasir J, et al., The murine homologues of the Huntington disease gene (Hdh) and the alpha-adducin gene (Add1) map to mouse chromosome 5 within a region of conserved synteny with human chromosome 4p16.3. Genomics. 1994 Jul 1;22(1):198-201
• ID
  MGI:43646

Genes

Gene	Assay Type	Description
En2	Southern analysis	mp2
Haus3	reported elsewhere
Ctbp1	reported elsewhere
Htt	Southern analysis	MHD84
Add1	Southern analysis	ADU1.2
D5H4S62	reported elsewhere
Qdpr	reported elsewhere
D5H4S76	reported elsewhere
D5H4S80	reported elsewhere
Idua	reported elsewhere
Kit	reported elsewhere

Notes

• Experiment
  Re and Tr are segregating in the F1 female progenitor C57BL/6J.Offspring types indicate alleles inherited from F1 parent.
  F1 direction known.
  

CROSS

• Type
  Backcross, female
• Female Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<s> <s> <s> <s> <s> <s> <s> <s> <s> <s> <s>
• Strain
  (C57BL/6J x M. spretus)F1
• Male Parent
  <b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>/<b> <b> <b> <b> <b> <b> <b> <b> <b> <b> <b>
• Strain
  C57BL/6J
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

CROSS Data

MC #mice	En2	Haus3	Ctbp1	Htt	Add1	D5H4S62	Qdpr	D5H4S76	D5H4S80	Idua	Kit
12	s	s	s	s	s	s	s	s	s	s	s
8	b	b	b	b	b	b	b	b	b	b	b
14	.	s	s	s	s	s	s	s	s	s	s
15	.	b	b	b	b	b	b	b	b	b	b
1	s	b	b	b	b	b	b	b	b	b	b
3	.	s	s	s	s	s	b	b	b	b	b
1	.	b	b	b	b	b	b	s	s	s	s
2	.	b	b	b	b	b	b	b	b	s	s
2	.	s	s	s	s	s	s	s	s	s	b
6	b	b	b	b	b	b	b	.	.	s	s
2	s	s	s	s	s	s	s	.	.	b	b

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
En2	Haus3	1	29	3.448	3.388
Haus3	Ctbp1	0	66	0.000	0.000
Ctbp1	Htt	0	66	0.000	0.000
Htt	Add1	0	66	0.000	0.000
Add1	D5H4S62	0	66	0.000	0.000
D5H4S62	Qdpr	3	66	4.545	2.564
Qdpr	D5H4S76	1	58	1.724	1.709
D5H4S76	D5H4S80	0	58	0.000	0.000
D5H4S80	Idua	2	58	3.448	2.396
Idua	Kit	2	66	3.030	2.110