Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  1
• Reference
  J:3288 Oakey RJ, et al., Construction of a physical map on mouse and human chromosome 1: comparison of 13 Mb of mouse and 11 Mb of human DNA. Hum Mol Genet. 1992 Nov;1(8):613-20
• ID
  MGI:42300

Genes

Gene	Assay Type	Description
Sell	PFGE	Lnhr cDNA
Atp1b1	PFGE	rb19G
Cd247	PFGE	Cd3z cDNA
Pou2f1	PFGE	pBSoct-1+
Pbx1	PFGE	pr1489
Rxrg	PFGE	Rxrg cDNA
Fcgr2b	PFGE	FcR(beta)1
Fcgr3	PFGE	FcR(alpha)
Mpz	PFGE	1st exon
Apoa2	PFGE	Apoa-2 cDNA
Fcer1g	PFGE	Fcer1g cDNA
Cd48	PFGE	Cd48 cDNA
Atp1a2	PFGE	z13C
Apcs	PFGE	MSAP5
Fcer1a	PFGE	Fcer1a cDNA
Crp	PFGE	Crp cDNA
Spta1	PFGE	pMaSp1

Notes

• Reference
  Pbx1 referred to in reference as Pbx.
  Fcgr2b referred to in reference as Fcgr2
• Experiment
  Physical order of genes over 13 Mb of distal mouse Chromosome 1 was determined. The physical distance between loci in kbs was also determined for some of the loci. Genetic order derived from backcross mice was used as the framework to determine physical order. The order of genes was given as follows (where appropriate, distances in kb are provided parenthetically): Sell - (2200-2400kb) - Atp1b1 (100-200kb) - Cd247 - Pou2f1 - Pbx1 - Rxrg - Fcgr2b - Fcgr3 - (200kb) - Mpz - Apoa2 - Fcer1g - (200-1000kb) - Cd48 - (200-100kb) - Atp1a2 - (500-1200kb) - Apcs, Fcer1a - Crp - (100-1000kb) - Spna1.