Mapping Data

Experiment

• Experiment
  CROSS
• Chromosome
  5
• Reference
  J:80918 Smith JB, et al., Cloning and genomic localization of the murine LPS-induced CXC chemokine (LIX) gene, Scyb5. Immunogenetics. 2002 Nov;54(8):599-603
• ID
  MGI:2653113

Genes

Gene	Assay Type	Description
Lrpap1
D5Mit54
D5Mit5
D5Mit274
D5Ucla1
D5Mit259
D5Ucla5
Cxcl5	Southern analysis	Lix probe
D5Ucla6
Hspb8
D5Mit89
Tpst2
Ubc
Mvk
D5Mit65
Scarb1
Rhof
Gusb

Notes

• Experiment
  Offspring types indicate alleles inherited from F1 parent.
  

CROSS

• Type
  Backcross, female
• Strain
  (C57BL/6J x M. spretus)F1
• Strain
  C57BL/6J
• Mapping Panel
  UCLA (BSB)
• Allele 1
  b from C57BL/6J
• Allele 2
  s from M. spretus

2x2 Data Reported

Marker 1	Marker 2	# Recombinants	# Parentals
Lrpap1	D5Mit54	6	58
D5Mit54	D5Mit5	5	59
D5Mit5	D5Mit274	7	59
D5Mit5	D5Ucla1	7	59
D5Mit274	D5Mit259	2	62
D5Ucla1	D5Mit259	2	62
D5Mit259	D5Ucla5	2	59
D5Mit259	Cxcl5	2	59
D5Ucla5	Cxcl5	0	61
D5Ucla5	D5Ucla6	2	61
Cxcl5	D5Ucla6	2	61
D5Ucla6	Hspb8	3	61
Hspb8	D5Mit89	2	64
D5Mit89	Tpst2	2	64
D5Mit89	Ubc	2	64
D5Mit89	Mvk	2	64
Tpst2	Ubc	0	62
Tpst2	Mvk	0	62
Tpst2	D5Mit65	1	65
Tpst2	Scarb1	1	65
Tpst2	Rhof	1	65
Ubc	D5Mit65	1	65
Ubc	Scarb1	1	65
Ubc	Rhof	1	65
Mvk	D5Mit65	1	65
Mvk	Scarb1	1	65
Mvk	Rhof	1	65
D5Mit65	Scarb1	0	66
D5Mit65	Rhof	0	66
D5Mit65	Gusb	4	59
Scarb1	Gusb	4	59
Rhof	Gusb	4	59

Statistics

Marker 1	Marker 2	# Recombinants	Total	% Recombinants	Std Error
Lrpap1	D5Mit54	6	64	9.375	3.644
D5Mit54	D5Mit5	5	64	7.812	3.355
D5Mit5	D5Mit274	7	66	10.606	3.790
D5Mit5	D5Ucla1	7	66	10.606	3.790
D5Mit274	D5Mit259	2	64	3.125	2.175
D5Ucla1	D5Mit259	2	64	3.125	2.175
D5Mit259	D5Ucla5	2	61	3.279	2.280
D5Mit259	Cxcl5	2	61	3.279	2.280
D5Ucla5	Cxcl5	0	61	0.000	0.000
D5Ucla5	D5Ucla6	2	63	3.175	2.209
Cxcl5	D5Ucla6	2	63	3.175	2.209
D5Ucla6	Hspb8	3	64	4.688	2.642
Hspb8	D5Mit89	2	66	3.030	2.110
D5Mit89	Tpst2	2	66	3.030	2.110
D5Mit89	Ubc	2	66	3.030	2.110
D5Mit89	Mvk	2	66	3.030	2.110
Tpst2	Ubc	0	62	0.000	0.000
Tpst2	Mvk	0	62	0.000	0.000
Tpst2	D5Mit65	1	66	1.515	1.504
Tpst2	Scarb1	1	66	1.515	1.504
Tpst2	Rhof	1	66	1.515	1.504
Ubc	D5Mit65	1	66	1.515	1.504
Ubc	Scarb1	1	66	1.515	1.504
Ubc	Rhof	1	66	1.515	1.504
Mvk	D5Mit65	1	66	1.515	1.504
Mvk	Scarb1	1	66	1.515	1.504
Mvk	Rhof	1	66	1.515	1.504
D5Mit65	Scarb1	0	66	0.000	0.000
D5Mit65	Rhof	0	66	0.000	0.000
D5Mit65	Gusb	4	63	6.349	3.072
Scarb1	Gusb	4	63	6.349	3.072
Rhof	Gusb	4	63	6.349	3.072