Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  10
• Reference
  J:64475 Puttagunta R, et al., Comparative maps of human 19p13.3 and mouse chromosome 10 allow identification of sequences at evolutionary breakpoints. Genome Res. 2000 Sep;10(9):1369-80
• ID
  MGI:1930626

Genes

Gene	Assay Type
D10Mit207	PFGE
Cdc34	PFGE
Shc2	PFGE
Bsg	PFGE
Gzmm	PFGE
Ptbp1	PFGE
Elane	PFGE
Cfd	PFGE
Gpx4	PFGE
Cirbp	PFGE
Efna2	PFGE
D10Mit226	PFGE
Pcsk4	PFGE
D10Mit21	PFGE
Tcf3	PFGE
D10Mit23	PFGE
Abhd17a	PFGE
Ap3d1	PFGE
Amh	PFGE
Sf3a2	PFGE
Oaz1	PFGE
Lmnb2	PFGE
Gng7	PFGE
Thop1	PFGE
Creb3l3	PFGE
D10Wad2	PFGE
Map2k2	PFGE
Minta	PFGE
Dapk3	PFGE
Mrpl54	PFGE
Matk	PFGE
Tbxa2r	PFGE
Hmg20b	PFGE
Gna11	PFGE
Gna15	PFGE
Tle5	PFGE
Sirt6	PFGE
Ankrd24	PFGE
D10Mit22	PFGE
D10Mit140	PFGE
D10Mit42	PFGE
Nfyb	PFGE

Notes

• Experiment
  Authors developed a PFGE map of mouse Chromosome 10 in a region of homology to human 19p13.3. Probes were develpoed from published genes and the emerging human sequence data. Additionally, data from the genetic map were also integrated into the physical map of the region. The size of the conserved region in mouse (~2500-2900kb) was smaller than the homologous region in humans (~3800kb). The order of markers on mouse Chromosome 10 was estimated to be: centromere - D10Mit207 - Cdc34 - Shc2 - Bsg - Gzmm - Ptb1 - F430011M15Rik - Adn - Gpx4 - Cirbp - Efna2 - D10Mit226 - Pcsk4 - D10Mit21 - Tcfe2a - D10Mit23 - D10Bwg1364e - Ap3d - Amh - Sf3a2 - Oaz1 - Lmnb2 - Gng7 - Thop1 - Creb313 - D10Wad2 - Map2k2 - Minta - Dapk3 - D10Sut1e - Matk - Tbxa2r - Hmg20b - Gna11 -Gna15 - Aes - Sirt6 - Ankrd24 - D10Mit22 - D10Mit140 - D10Mit42 - Nfyb. Ela2 was used for F430011M15Rik.