Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  7
• Reference
  J:65742 Onyango P, et al., Sequence and comparative analysis of the mouse 1-megabase region orthologous to the human 11p15 imprinted domain. Genome Res. 2000 Nov;10(11):1697-710
• ID
  MGI:1930544

Genes

Gene	Assay Type
Mrpl23	overlapping clones, direct sequencing
Nctc1	overlapping clones, direct sequencing
H19	overlapping clones, direct sequencing
Ihit1	overlapping clones, direct sequencing
Igf2	overlapping clones, direct sequencing
Ins2	overlapping clones, direct sequencing
Rpl13	overlapping clones, direct sequencing
Naip3l1	overlapping clones, direct sequencing
Th	overlapping clones, direct sequencing
Ascl2	overlapping clones, direct sequencing
Tspan32	overlapping clones, direct sequencing
Cd81	overlapping clones, direct sequencing
Tssc4	overlapping clones, direct sequencing
Trpm5	overlapping clones, direct sequencing
Kcnq1	overlapping clones, direct sequencing
Kcnq1ot1	overlapping clones, direct sequencing
Kcnq1ot1	overlapping clones, direct sequencing
Cdkn1c	overlapping clones, direct sequencing
AF313042	overlapping clones, direct sequencing
Slc22a18	overlapping clones, direct sequencing
Phlda2	overlapping clones, direct sequencing
Nap1l4	overlapping clones, direct sequencing

Notes

• Experiment
  The authors compare a ~1 Mb imprinted genomic region on mouse Chromosome 7 to its orthologous region on humna Chromosome 11p15.5. Using comparative genomics and sequence analysis tools, they were able to identify several genes in this region. The order of markers was determined to be: centromere - Mrpl23 - Nctc1 - 3'- H19 - 5' - Ihit1 - 3'- Igf2 - 5' - 3'- Ins2 - 5' - Rpl13 - Birc1cl - 3'- Th - 5' - 3'- Ascl2 - 5' - Tspan32 - 5'- Cd81 - 3' - Tssc4 - Trpm5 - 5'- Kcnq1 - 3' - 3'- Kcnq1ot1 - 5' - Tssc8 - 3'-Cdkn1c - 5' - AF313042 - 5'- Slc22a1l - 3' - 3'- Tssc3 - 5' - 3'-Nap1l4 - 5' - telomere.