Mapping Data

Experiment

• Experiment
  TEXT-Physical Mapping
• Chromosome
  13
• Reference
  J:61136 Growney JD, et al., Evolutionary divergence of the mouse and human Lgn1/SMA repeat structures. Genomics. 2000 Feb 15;64(1):62-81
• ID
  MGI:1858908

Genes

Gene	Assay Type
D13Mit36	overlapping clones
Map1b	overlapping clones
D13Die4	overlapping clones
D13Die21	overlapping clones
D13Die8	overlapping clones
D13Die5	overlapping clones
D13Die20	overlapping clones
D13Mit146	overlapping clones
D13Die9	overlapping clones
D13Die14	overlapping clones
D13Die15	overlapping clones
Bdp1	overlapping clones
D13Die11	overlapping clones
D13Die22	overlapping clones
Serf1	overlapping clones
D13Die6	overlapping clones
D13Die13	overlapping clones
Smn1	overlapping clones
D13Die26	overlapping clones
Naip2	overlapping clones
D13Die27	overlapping clones
D13Die29d	overlapping clones
D13Die25b	overlapping clones
Naip5	overlapping clones
D13Die7b	overlapping clones
D13Die29a	overlapping clones
D13Die25a	overlapping clones
D13Die30a	overlapping clones
Naip3-ps1	overlapping clones
Naip7	overlapping clones
D13Die7d	overlapping clones
D13Die29b	overlapping clones
D13Die25c	overlapping clones
D13Die30b	overlapping clones
Naip3-ps2	overlapping clones
Naip4	overlapping clones
D13Die7c	overlapping clones
D13Die29c	overlapping clones
D13Die25d	overlapping clones
D13Die30c	overlapping clones
Naip3-ps3	overlapping clones
Naip6
D13Die7a	overlapping clones
Naip3	overlapping clones
Naip1	overlapping clones
D13Die3	overlapping clones
Gtf2h2	overlapping clones
Ocln	overlapping clones
Naip5	resistance/susceptibility
Cdk7	overlapping clones
Ccnb1	overlapping clones
D13Die34

Notes

• Experiment
  Authors constructed an overlapping BAC/P1 clone map of the Lgn1 interval and determine the following order/orientation of markers on mouse Chromosome 13: centromere - D13Mit36 - Mtap1b - D13Die4 - D13Die21 - D13Die8 (D13Die5, D13Die20) - (D13Mit146, D13Die9, D13Die14, D13Die15) - 3' - Bdp1 - 5' - D13Die11 - (5' - Serf1 - 3', D13Die22) - D13Die6 - (5' - Smn1 - 3' - D13Die13) - (D13Die26 - 3' - Birc1b - 5') - D13Die27 - D13Die29d - D13Die25b - 3' - Birc1e - 5' - D13Die7b - (D13Die30a, 3' - Birc1c-ps1 5' ) -D13Die29a - D13Die25a - 3' - Birc1g - 5' - D13Die7d - (D13Die30b, 3' - Birc1c-ps2 - 5') - D13Die29b - D13Die25c - 3' - Birc1d - 5' - D13Die7c - (D13Die30c, 3' - Birc1c-ps3 - 5') - D13Die29c, D13Die25d - 3' - Birc1f - 5' - 3' - Birc1c - 5' - (3' - Birc1a -5', D13Die3) - 3' - Gtf2h2 - 5' - Ocln - Cdk7 - Ccnb1. The Lgn1 interval was narrowed to the region bewteen the markers D13Die26 and D13Die25d. D13Die34 wa also included within this region.