Mapping Data

Experiment

• Experiment
  TEXT
• Chromosome
  17
• Reference
  J:44921 Snoek M, et al., Molecular analysis of the major MHC recombinational hot spot located within the G7c gene of the murine class III region that is involved in disease susceptibility. J Immunol. 1998 Jan 1;160(1):266-72
• ID
  MGI:1309942

Genes

Gene	Assay Type
Hspa1b	reported elsewhere
Hspa1a	reported elsewhere
Hspa1l	reported elsewhere
Lsm2	reported elsewhere
D17Nki7	PCR amplified length variant
D17Nki8	PCR amplified length variant
D17Nki9	PCR amplified length variant
D17H6S56E-5	PCR amplified length variant
D17H6S56E-1	reported elsewhere
D17Nki5	PCR amplified length variant
D17Nki6	PCR amplified length variant
D17Nki10	PCR amplified length variant
D17Nki11	PCR amplified length variant
D17Nki12	PCR amplified length variant
D17Nki13	PCR amplified length variant
Vwa7	reported elsewhere
D17Nki14	PCR amplified length variant
D17Nki15	PCR amplified length variant
D17Nki16	PCR amplified length variant
D17Nki17	PCR amplified length variant
Vars1	reported elsewhere
Abhd16a	reported elsewhere

Notes

• Reference
  Authors use G7e, G7b, G7a and Bat6, and G7 for locus symbols D17H6S56E-5, D17H6S56E-2, D17H6S56E-1 and D17H6S56E respectively.
• Experiment
  Markers demonstrating polymorphisms between various H2 haplotype strains were informative in defining a 2.4kb recombinational hotspot within marker D17H6S56E-3 on mouse Chromosome 17. The D17Nki markers were placed as follows: 3' - Hspa1b - 5' - 3' - Hspa1a - 5' - 5" Hspa1l - 3' - 5' Lsm2 - 3' - (containing D17Nki7 - D7Nki8) - D17Nki9 - 3' - D17H6S56E-5 - 5' - 5' - D17H6S56E-1 - 3' - (containing D17Nki5 - D17Nki6 - D17Nki10 - D17Nki11 - D17Nki12) - D17Nki13 - D17H6S56E-3 - D17Nki14 - D17Nki15 - D17Nki16 - D17Nki17 - 3' D17H6S56E - 5' - Bat5. The distance between D17Nki4 and Vars2 is approximately 50kb.